FAIRMol

NMT-TY0624

Pose ID 21647 Compound 173 Pose 1131

DB Docking_panel_21Docking pose analysis is being read from this database.
Molecular metrics status: queued
Pose metrics recompute is queued in the background.
Metrics cached · SASA missing

py3Dmol interaction viewer

Left: interactive complex viewer. Right: clickable PLIP-like interaction summary. Clicking an interaction thickens and highlights it in the 3D view.
Strict H-bonds Permissive H-bonds
Overall: Promising but geometrically suspicious
Binding evidence: strong
Native-like contacts: strong
Ligand efficiency: weak
Geometry reliability: low
Reason: geometry warning, clashes

Interaction summary

Collapsible panels
H-bonds 2 Hydrophobic 24 π–π 4 Clashes 9 Severe clashes 1
Final rank5.991267438796109Score-22.6627
Inter norm-0.874346Intra norm0.00270293
Top1000noExcludedyes
Contacts18H-bonds2
Artifact reasonexcluded; geometry warning; 9 clashes; 1 protein clash; high strain Δ 24.3
ResiduesA:ASN125;A:ASP127;A:GLY191;A:HIS144;A:HIS222;A:ILE126;A:ILE48;A:LEU194;A:LEU93;A:LEU95;A:PHE189;A:PHE190;A:PHE51;A:PHE74;A:PRO223;A:VAL187;A:VAL188;A:VAL221

Protein summary

287 residues
Protein targetT11Atoms4391
Residues287Chains1
Residue summaryLEU:627; ARG:432; VAL:384; GLU:316; PHE:300; ILE:285; ALA:260; PRO:238; HIS:187; ASP:157; LYS:154; SER:154; THR:154; GLY:147; ASN:140; TYR:126

Native ligand reference

★ reference
Interaction fingerprint calculated directly from the uploaded native ligand without docking. Current H-bond mode: strict.
Name5OL0Contacts18
PoseOpen native poseH-bonds5
IFP residuesA:ASN193; A:GLN220; A:GLU192; A:GLY191; A:HIS144; A:HIS222; A:ILE126; A:LEU194; A:LEU226; A:PHE189; A:PHE190; A:PHE199; A:PHE74; A:PRO223; A:THR71; A:VAL187; A:VAL188; A:VAL221
Current overlap12Native recall0.67
Jaccard0.50RMSD-
H-bond strict1Strict recall0.20
H-bond same residue+role1Role recall0.20
H-bond same residue1Residue recall0.25

Hydrogen bonds

Mode: strict. Count shows atom-level H-bonds; unique residues in summary: 0.

π–π interactions

Native π–π recall is disabled because no explicit native π–π reference was stored.

Hydrophobic contacts

Clashes

All stored poses for this docking hit

PoseFinal rankInter normScoreHBContactsNative overlapNative recallHB role recallRMSDExcluded
2246 4.048284375854253 -1.04872 -26.7171 9 18 0 0.00 0.00 - no Open
2243 4.288052778846944 -1.25519 -32.5296 10 15 0 0.00 0.00 - no Open
3022 4.411928249062233 -0.761361 -19.7417 7 14 0 0.00 0.00 - no Open
2169 4.442783755514541 -1.24065 -32.9492 6 14 0 0.00 0.00 - no Open
2164 4.4846661669201096 -1.15783 -29.1433 7 16 0 0.00 0.00 - no Open
2896 4.897195432959876 -0.789524 -20.5084 7 14 0 0.00 0.00 - no Open
2244 5.120049347332111 -1.13034 -27.6215 7 17 0 0.00 0.00 - no Open
2898 5.567628012450031 -1.02037 -26.076 10 16 0 0.00 0.00 - no Open
1461 5.863654542825484 -0.872696 -21.5239 4 14 0 0.00 0.00 - no Open
1128 6.100469721375786 -0.800187 -20.4352 5 17 12 0.67 0.20 - no Open
1464 6.539291133162575 -0.870731 -22.5441 5 14 0 0.00 0.00 - no Open
1458 5.745729076697848 -0.801159 -21.4331 2 10 0 0.00 0.00 - yes Open
2166 5.848429616560858 -0.893291 -18.6428 4 16 0 0.00 0.00 - yes Open
1459 5.9583376681157905 -0.873591 -23.2439 4 10 0 0.00 0.00 - yes Open
1131 5.991267438796109 -0.874346 -22.6627 2 18 12 0.67 0.20 - yes Current
2900 6.090771536952399 -1.01413 -25.7765 4 15 0 0.00 0.00 - yes Open
1127 6.110039055256233 -0.98969 -26.0458 5 18 13 0.72 0.20 - yes Open
2899 6.4583617072633634 -0.946639 -25.5693 10 16 0 0.00 0.00 - yes Open
2897 6.567787229344296 -0.913988 -24.7978 10 15 0 0.00 0.00 - yes Open
1130 6.5949362923053165 -0.998085 -25.5439 8 18 13 0.72 0.20 - yes Open
1462 7.374974849858531 -0.87158 -21.8899 4 10 0 0.00 0.00 - yes Open
2168 7.532207452291618 -0.875071 -26.4129 1 16 0 0.00 0.00 - yes Open
2167 7.666458623302066 -1.11884 -28.4951 8 16 0 0.00 0.00 - yes Open
1460 8.250298486736646 -0.810949 -21.845 6 14 0 0.00 0.00 - yes Open
1129 8.254242531058082 -0.930814 -19.3027 6 16 11 0.61 0.20 - yes Open
3019 8.25900240591614 -0.86464 -22.829 8 13 0 0.00 0.00 - yes Open
1463 8.30609404017182 -0.871073 -22.9384 6 14 0 0.00 0.00 - yes Open
3021 8.349033091817553 -0.699228 -18.428 4 11 0 0.00 0.00 - yes Open
1132 8.411366486225013 -0.892958 -25.4658 2 16 13 0.72 0.20 - yes Open
2247 8.45954992657555 -0.991147 -25.6155 3 18 0 0.00 0.00 - yes Open
2165 8.696303748043917 -1.1187 -31.7533 7 16 0 0.00 0.00 - yes Open
3020 9.005529018556219 -0.872118 -21.6077 9 12 0 0.00 0.00 - yes Open
2245 11.062695961720653 -0.982108 -24.8924 7 16 0 0.00 0.00 - yes Open
2241 11.877691447868813 -0.88272 -22.3576 7 12 0 0.00 0.00 - yes Open
2242 13.066560835282246 -0.935063 -24.6437 9 10 0 0.00 0.00 - yes Open

Molecular metrics

FreeSASA-based burial, strain energy (MMFF94s), ligand efficiency and fit quality for this docking pose.
⚠ Not yet computed
Molecular metrics have not been computed for this pose yet. This page now reads only cached values; use a background recompute when you want fresh metrics without slowing the UI.