FAIRMol

NMT-TY0577

Pose ID 21575 Compound 512 Pose 1059

DB Docking_panel_21Docking pose analysis is being read from this database.
Molecular metrics status: queued
Pose metrics recompute is queued in the background.
Metrics cached · SASA missing

py3Dmol interaction viewer

Left: interactive complex viewer. Right: clickable PLIP-like interaction summary. Clicking an interaction thickens and highlights it in the 3D view.
Strict H-bonds Permissive H-bonds
Overall: Promising but geometrically suspicious
Binding evidence: strong
Native-like contacts: strong
Ligand efficiency: weak
Geometry reliability: low
Reason: geometry warning, clashes

Interaction summary

Collapsible panels
H-bonds 11 Hydrophobic 21 π–π 4 Clashes 12 Severe clashes 1
Final rank7.922735244763697Score-23.4711
Inter norm-1.048Intra norm0.0275217
Top1000noExcludedyes
Contacts13H-bonds11
Artifact reasonexcluded; hard geometry fail; 1 severe clash; 1 protein clash; high strain Δ 36.8
ResiduesA:GLN220;A:GLU192;A:GLY191;A:HIS144;A:HIS222;A:LEU194;A:PHE189;A:PHE190;A:PHE224;A:PHE74;A:PRO223;A:VAL188;A:VAL221

Protein summary

287 residues
Protein targetT11Atoms4391
Residues287Chains1
Residue summaryLEU:627; ARG:432; VAL:384; GLU:316; PHE:300; ILE:285; ALA:260; PRO:238; HIS:187; ASP:157; LYS:154; SER:154; THR:154; GLY:147; ASN:140; TYR:126

Native ligand reference

★ reference
Interaction fingerprint calculated directly from the uploaded native ligand without docking. Current H-bond mode: strict.
Name5OL0Contacts18
PoseOpen native poseH-bonds5
IFP residuesA:ASN193; A:GLN220; A:GLU192; A:GLY191; A:HIS144; A:HIS222; A:ILE126; A:LEU194; A:LEU226; A:PHE189; A:PHE190; A:PHE199; A:PHE74; A:PRO223; A:THR71; A:VAL187; A:VAL188; A:VAL221
Current overlap12Native recall0.67
Jaccard0.63RMSD-
H-bond strict3Strict recall0.60
H-bond same residue+role3Role recall0.60
H-bond same residue3Residue recall0.75

Hydrogen bonds

Mode: strict. Count shows atom-level H-bonds; unique residues in summary: 0.

π–π interactions

Native π–π recall is disabled because no explicit native π–π reference was stored.

Hydrophobic contacts

Clashes

All stored poses for this docking hit

PoseFinal rankInter normScoreHBContactsNative overlapNative recallHB role recallRMSDExcluded
2848 3.1609271893686097 -1.03549 -24.1606 6 16 0 0.00 0.00 - no Open
1060 3.336458242861153 -1.03157 -23.2394 8 18 12 0.67 0.20 - no Open
1057 3.6221111580558065 -0.947237 -21.5636 2 17 11 0.61 0.20 - no Open
2217 3.6790013135047768 -1.14574 -25.3553 6 14 0 0.00 0.00 - no Open
2849 4.123402787243458 -1.08583 -23.896 8 16 0 0.00 0.00 - no Open
1373 4.575019733347909 -0.866629 -17.6713 6 13 0 0.00 0.00 - no Open
1370 4.686958813923712 -0.923016 -23.3717 9 14 0 0.00 0.00 - no Open
1058 4.861752626562554 -1.06321 -21.6989 6 18 12 0.67 0.20 - no Open
2850 5.019088194080138 -1.02138 -23.492 8 16 0 0.00 0.00 - no Open
2218 6.012865386417346 -1.24284 -25.2174 8 14 0 0.00 0.00 - no Open
1372 6.180580653679305 -0.830985 -18.4822 5 13 0 0.00 0.00 - no Open
1369 3.8223140432413016 -0.883037 -20.9971 4 10 0 0.00 0.00 - yes Open
2851 4.96865366664588 -1.07326 -24.7165 9 16 0 0.00 0.00 - yes Open
1059 7.922735244763697 -1.048 -23.4711 11 13 12 0.67 0.60 - yes Current
1371 8.553968468576814 -0.871366 -22.575 5 12 0 0.00 0.00 - yes Open

Molecular metrics

FreeSASA-based burial, strain energy (MMFF94s), ligand efficiency and fit quality for this docking pose.
⚠ Not yet computed
Molecular metrics have not been computed for this pose yet. This page now reads only cached values; use a background recompute when you want fresh metrics without slowing the UI.