FAIRMol

KB_Leish_138

Pose ID 21038 Compound 2030 Pose 522

DB Docking_panel_21Docking pose analysis is being read from this database.
Molecular metrics status: queued
Pose metrics recompute is queued in the background.
Metrics cached · SASA missing

py3Dmol interaction viewer

Left: interactive complex viewer. Right: clickable PLIP-like interaction summary. Clicking an interaction thickens and highlights it in the 3D view.
Strict H-bonds Permissive H-bonds
Overall: Promising but geometrically suspicious
Binding evidence: strong
Native-like contacts: strong
Ligand efficiency: weak
Geometry reliability: low
Reason: geometry warning, clashes

Interaction summary

Collapsible panels
H-bonds 3 Hydrophobic 24 π–π 2 Clashes 10 Severe clashes 1
Final rank7.236544340492914Score-19.2146
Inter norm-0.639496Intra norm0.0196707
Top1000noExcludedyes
Contacts13H-bonds3
Artifact reasonexcluded; geometry warning; 12 clashes; 1 protein clash; high strain Δ 28.2
ResiduesA:GLU192;A:GLY191;A:HIS144;A:HIS222;A:ILE126;A:LEU194;A:PHE189;A:PHE190;A:PHE74;A:PRO223;A:VAL187;A:VAL188;A:VAL221

Protein summary

287 residues
Protein targetT11Atoms4391
Residues287Chains1
Residue summaryLEU:627; ARG:432; VAL:384; GLU:316; PHE:300; ILE:285; ALA:260; PRO:238; HIS:187; ASP:157; LYS:154; SER:154; THR:154; GLY:147; ASN:140; TYR:126

Native ligand reference

★ reference
Interaction fingerprint calculated directly from the uploaded native ligand without docking. Current H-bond mode: strict.
Name5OL0Contacts18
PoseOpen native poseH-bonds5
IFP residuesA:ASN193; A:GLN220; A:GLU192; A:GLY191; A:HIS144; A:HIS222; A:ILE126; A:LEU194; A:LEU226; A:PHE189; A:PHE190; A:PHE199; A:PHE74; A:PRO223; A:THR71; A:VAL187; A:VAL188; A:VAL221
Current overlap13Native recall0.72
Jaccard0.72RMSD-
H-bond strict2Strict recall0.40
H-bond same residue+role2Role recall0.40
H-bond same residue2Residue recall0.50

Hydrogen bonds

Mode: strict. Count shows atom-level H-bonds; unique residues in summary: 0.

π–π interactions

Native π–π recall is disabled because no explicit native π–π reference was stored.

Hydrophobic contacts

Clashes

All stored poses for this docking hit

PoseFinal rankInter normScoreHBContactsNative overlapNative recallHB role recallRMSDExcluded
2191 4.933265801362015 -0.82311 -19.2382 8 14 0 0.00 0.00 - no Open
1963 5.151644491418872 -0.639354 -18.2985 3 14 14 0.78 0.40 - no Open
632 5.242404875752358 -0.634898 -15.4953 8 13 0 0.00 0.00 - no Open
2399 5.366229257605605 -0.539297 -15.7853 2 12 0 0.00 0.00 - no Open
524 5.782423603511617 -0.671026 -19.3381 2 15 15 0.83 0.40 - no Open
309 6.30298998699393 -0.726246 -16.665 5 14 0 0.00 0.00 - no Open
2193 6.504544124833952 -0.737627 -17.5959 8 14 0 0.00 0.00 - no Open
1961 6.475297737683148 -0.643189 -19.263 3 14 14 0.78 0.40 - yes Open
1962 6.609611987173995 -0.786115 -21.2543 5 14 14 0.78 0.40 - yes Open
522 7.236544340492914 -0.639496 -19.2146 3 13 13 0.72 0.40 - yes Current
1960 7.529626102963168 -0.705895 -20.907 4 14 14 0.78 0.40 - yes Open
2400 8.326584944692481 -0.602994 -14.3882 5 8 0 0.00 0.00 - yes Open
630 8.635734887859861 -0.667787 -19.8976 3 12 0 0.00 0.00 - yes Open
307 8.682843058096125 -0.667065 -14.8126 8 14 0 0.00 0.00 - yes Open
2398 8.735685081440591 -0.51159 -13.5099 4 13 0 0.00 0.00 - yes Open
2401 9.115890758024722 -0.564383 -12.2701 5 9 0 0.00 0.00 - yes Open
306 9.658961044138547 -0.826819 -16.7461 8 15 0 0.00 0.00 - yes Open
308 10.378477268504499 -0.797818 -16.1509 8 15 0 0.00 0.00 - yes Open
629 10.60523517213541 -0.706755 -13.6687 4 16 0 0.00 0.00 - yes Open
523 57.018845257322354 -0.764539 -21.2514 4 14 14 0.78 0.40 - yes Open
521 57.051529316757176 -0.747435 -20.621 4 14 14 0.78 0.40 - yes Open
2190 58.435684432253936 -0.82715 -16.8709 8 15 0 0.00 0.00 - yes Open
2192 59.811575252824014 -0.799582 -16.0793 8 15 0 0.00 0.00 - yes Open
631 59.91251114089751 -0.793708 -16.1957 4 17 0 0.00 0.00 - yes Open

Molecular metrics

FreeSASA-based burial, strain energy (MMFF94s), ligand efficiency and fit quality for this docking pose.
⚠ Not yet computed
Molecular metrics have not been computed for this pose yet. This page now reads only cached values; use a background recompute when you want fresh metrics without slowing the UI.