FAIRMol

KB_Leish_46

Pose ID 20994 Compound 2158 Pose 478

DB Docking_panel_21Docking pose analysis is being read from this database.
Molecular metrics status: queued
Pose metrics recompute is queued in the background.
Metrics cached · SASA missing

py3Dmol interaction viewer

Left: interactive complex viewer. Right: clickable PLIP-like interaction summary. Clicking an interaction thickens and highlights it in the 3D view.
Strict H-bonds Permissive H-bonds
Overall: Promising but geometrically suspicious
Binding evidence: strong
Native-like contacts: strong
Ligand efficiency: weak
Geometry reliability: low
Reason: geometry warning, clashes

Interaction summary

Collapsible panels
H-bonds 6 Hydrophobic 24 π–π 3 Clashes 8 Severe clashes 1
Final rank55.39429729710436Score-24.6041
Inter norm-0.780113Intra norm0.0112366
Top1000noExcludedyes
Contacts12H-bonds6
Artifact reasonexcluded; geometry warning; 9 clashes; 1 protein clash
ResiduesA:GLN220;A:GLU192;A:GLY191;A:HIS144;A:HIS222;A:LEU194;A:PHE189;A:PHE190;A:PHE74;A:PRO223;A:VAL188;A:VAL221

Protein summary

287 residues
Protein targetT11Atoms4391
Residues287Chains1
Residue summaryLEU:627; ARG:432; VAL:384; GLU:316; PHE:300; ILE:285; ALA:260; PRO:238; HIS:187; ASP:157; LYS:154; SER:154; THR:154; GLY:147; ASN:140; TYR:126

Native ligand reference

★ reference
Interaction fingerprint calculated directly from the uploaded native ligand without docking. Current H-bond mode: strict.
Name5OL0Contacts18
PoseOpen native poseH-bonds5
IFP residuesA:ASN193; A:GLN220; A:GLU192; A:GLY191; A:HIS144; A:HIS222; A:ILE126; A:LEU194; A:LEU226; A:PHE189; A:PHE190; A:PHE199; A:PHE74; A:PRO223; A:THR71; A:VAL187; A:VAL188; A:VAL221
Current overlap12Native recall0.67
Jaccard0.67RMSD-
H-bond strict3Strict recall0.60
H-bond same residue+role3Role recall0.60
H-bond same residue3Residue recall0.75

Hydrogen bonds

Mode: strict. Count shows atom-level H-bonds; unique residues in summary: 0.

π–π interactions

Native π–π recall is disabled because no explicit native π–π reference was stored.

Hydrophobic contacts

Clashes

All stored poses for this docking hit

PoseFinal rankInter normScoreHBContactsNative overlapNative recallHB role recallRMSDExcluded
662 4.148763856501447 -0.541093 -16.1203 4 10 0 0.00 0.00 - no Open
664 4.241479096583568 -0.560142 -19.2475 4 9 0 0.00 0.00 - no Open
473 4.461407212054066 -0.615052 -13.4525 3 13 12 0.67 0.40 - no Open
475 4.469597438959104 -0.644568 -19.1924 6 13 12 0.67 0.60 - no Open
648 4.52234586777562 -0.445278 -14.9075 1 12 0 0.00 0.00 - no Open
668 4.641953442945015 -0.587023 -19.525 2 13 0 0.00 0.00 - no Open
476 4.810984502431025 -0.667405 -21.9805 2 12 11 0.61 0.40 - no Open
650 5.1972693962280925 -0.500163 -14.2283 4 10 0 0.00 0.00 - no Open
647 5.418238696613943 -0.52826 -18.7362 2 10 0 0.00 0.00 - no Open
659 53.56761687232414 -0.528532 -13.8943 2 11 0 0.00 0.00 - no Open
657 53.853155183788694 -0.562264 -18.3111 3 11 0 0.00 0.00 - no Open
663 53.90053714170523 -0.530493 -19.6601 6 12 0 0.00 0.00 - no Open
666 54.19732051754386 -0.522386 -10.6079 4 10 0 0.00 0.00 - no Open
481 55.26265774251235 -0.90276 -27.0825 8 12 12 0.67 0.60 - no Open
465 6.508157733051288 -0.79263 -23.1879 1 17 8 0.44 0.00 - yes Open
466 7.8724065316936045 -0.53639 -17.8872 1 14 13 0.72 0.20 - yes Open
471 8.713456450651957 -0.592939 -17.8663 2 13 12 0.67 0.40 - yes Open
653 55.00235691197447 -0.552296 -17.678 3 10 0 0.00 0.00 - yes Open
645 55.2988025041855 -0.553296 -17.6307 4 11 0 0.00 0.00 - yes Open
478 55.39429729710436 -0.780113 -24.6041 6 12 12 0.67 0.60 - yes Current
646 55.511523894903775 -0.561592 -17.2708 2 10 0 0.00 0.00 - yes Open
661 55.56165144537245 -0.55013 -11.7194 3 12 0 0.00 0.00 - yes Open
654 55.671404453525795 -0.504739 -14.1188 2 9 0 0.00 0.00 - yes Open
487 56.011000608545885 -0.685551 -22.2314 2 14 13 0.72 0.40 - yes Open
667 56.11832251559403 -0.471753 -13.4683 3 9 0 0.00 0.00 - yes Open
665 56.17630469969773 -0.537334 -10.1902 4 10 0 0.00 0.00 - yes Open
485 56.36123985021602 -0.664916 -16.2739 2 14 13 0.72 0.40 - yes Open
651 56.815247669675415 -0.525257 -16.9567 2 9 0 0.00 0.00 - yes Open
655 56.87341180086008 -0.527965 -16.7011 5 10 0 0.00 0.00 - yes Open
660 56.96296246103646 -0.558299 -18.3397 3 8 0 0.00 0.00 - yes Open
484 56.966757399934835 -0.709084 -22.4225 2 16 11 0.61 0.20 - yes Open
656 57.1560047425855 -0.508937 -16.3236 6 13 0 0.00 0.00 - yes Open
658 57.1596777058425 -0.501073 -18.9835 3 12 0 0.00 0.00 - yes Open
486 57.195204715585845 -0.62612 -17.4015 3 13 13 0.72 0.40 - yes Open
472 57.435927709309624 -0.709056 -21.4917 3 12 11 0.61 0.40 - yes Open
479 57.52026557713096 -0.638636 -21.3923 3 12 11 0.61 0.60 - yes Open
474 57.67095960348714 -0.693293 -21.7786 7 13 13 0.72 0.80 - yes Open
482 57.72072801180435 -0.660282 -22.8045 4 12 11 0.61 0.60 - yes Open
649 57.81648455225807 -0.538673 -15.3857 3 12 0 0.00 0.00 - yes Open
477 58.08713462910262 -0.658987 -22.6011 3 13 12 0.67 0.40 - yes Open
652 58.2373887741407 -0.531449 -15.115 2 10 0 0.00 0.00 - yes Open
470 58.347067808977705 -0.729649 -20.6072 3 14 13 0.72 0.40 - yes Open
480 58.465779738470076 -0.671921 -16.1514 2 15 14 0.78 0.20 - yes Open
483 58.50256278368906 -0.762044 -27.3902 4 11 10 0.56 0.40 - yes Open
469 58.57920938142742 -0.767363 -19.3668 4 12 11 0.61 0.60 - yes Open
464 58.94102158206191 -0.767637 -23.0991 1 16 8 0.44 0.00 - yes Open
468 59.252251422917894 -0.676674 -15.3675 2 19 13 0.72 0.20 - yes Open
467 59.60668870398872 -0.684878 -22.6176 3 14 13 0.72 0.20 - yes Open

Molecular metrics

FreeSASA-based burial, strain energy (MMFF94s), ligand efficiency and fit quality for this docking pose.
⚠ Not yet computed
Molecular metrics have not been computed for this pose yet. This page now reads only cached values; use a background recompute when you want fresh metrics without slowing the UI.