T. brucei TR · T16
T. brucei
PDB 6RB5
Protein: Trypanothione reductase
Binding site: Dimer interface (site 2)
Receptor context: 1 cofactors / ions kept for scoring, 0 ligand-like HETATM excluded.
Kept context: A:FAD501
Targets
1
each capped at 50 ligands
Best-pose candidates
630
one best pose per ligand per target
Synth metric
SA score
direct SA metric
Absolute burial proxy
n_exposed
absolute exposed hydrophobic atoms, not fraction
Pareto front 1
37
non-dominated ligands across all selected targets
Burial source
FreeSASA 200
Proxy 0 · Missing 0
Metrics coverage
Done 200
Pending 0 · Failed 0 · Missing 0
Diversity shortlist
Novelty 0.45
High novelty 200 · Close analogs 0
New vs legacy top 50
Added 4 · Dropped 4
Stayed 196 of 200 legacy picks
T16
Native
Front 1: 37
200 / 630 shortlisted
Best: OHD_Leishmania_350 · score 55.1
Pareto layers observed: 10
Metrics: done 200 · pending 0 · failed 0 · missing 0
Diversity: novelty 0.45 · close analogs 0
New vs legacy: added 4 · dropped 4 · stayed 196/200
Added: KB_chagas_78, OHD_Leishmania_61, Z56958950
·
Dropped: OSA_Lib_227, OSA_Lib_3, OSA_Lib_74
| Target | 2D | Rank | Pareto | Assessment | Ligand | Compromise | Docking | Final rank | Inter norm | n_exposed | Strain dE | MW | cLogP | TPSA | SA score | Safety | Native sim | PAINS | Reactive | QED | SASA | Flags | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| T16 T16 |
|
1 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_350
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 5 protein contact clashes; moderate strain Δ 23.4, geometry warning, and strain ΔE = 23.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 411.7 · logP -5.57 · TPSA 112.5
|
55.1 | 0.73 | 0.4305 | -0.8425 | 0 | 23.36 | 411.7 | -5.57 | 112.5 | 7.553 | 0.70 | 0.77 | 0 | 0 | 0.25 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 5 protein contact clashes; moderate strain Δ 23.4
|
|
| T16 T16 |
|
2 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0404
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 22.0, geometry warning, and strain ΔE = 22.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 298.3 · logP 0.82 · TPSA 120.8
|
53.7 | 0.63 | 2.9705 | -1.4437 | 0 | 22.03 | 298.3 | 0.82 | 120.8 | 2.451 | 0.66 | 0.45 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 22.0
|
|
| T16 T16 |
|
3 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45762216
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 16 clashes; 1 protein contact clash; moderate strain Δ 21.9, geometry warning, and strain ΔE = 21.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 391.5 · logP 3.81 · TPSA 41.9
|
53.6 | 0.65 | 1.1228 | -0.8263 | 0 | 21.94 | 391.5 | 3.81 | 41.9 | 2.815 | 0.55 | 0.70 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 16 clashes; 1 protein contact clash; moderate strain Δ 21.9
|
|
| T16 T16 |
|
4 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2022_43
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 21.7, geometry warning, and strain ΔE = 21.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 296.4 · logP 1.83 · TPSA 100.3
|
53.6 | 0.63 | 1.6956 | -1.0400 | 1 | 21.74 | 296.4 | 1.83 | 100.3 | 2.834 | 0.70 | 0.47 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 21.7
|
|
| T16 T16 |
|
5 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2655
well-buried hydrophobics
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 4 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 333.5 · logP 3.22 · TPSA 36.7
|
52.6 | 0.65 | 1.0669 | -0.9087 | 1 | 15.02 | 333.5 | 3.22 | 36.7 | 3.299 | 0.62 | 0.51 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 4 protein contact clashes
|
|
| T16 T16 |
|
6 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_121
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 7 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 309.4 · logP 3.18 · TPSA 54.9
|
51.5 | 0.69 | 1.0510 | -1.0574 | 3 | 9.25 | 309.4 | 3.18 | 54.9 | 1.908 | 0.62 | 0.31 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 7 protein contact clashes
|
|
| T16 T16 |
|
7 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0772
strong docking, well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Strong docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 28.0, geometry warning, and strain ΔE = 28.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 280.3 · logP -0.55 · TPSA 153.2
|
52.2 | 0.80 | 1.3724 | -1.4469 | 0 | 27.98 | 280.3 | -0.55 | 153.2 | 3.061 | 0.53 | 0.45 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 28.0
|
|
| T16 T16 |
|
8 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC458
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 21.2 and strain ΔE = 21.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 453.6 · logP 4.18 · TPSA 80.4
|
50.6 | 0.46 | 2.3135 | -0.7046 | 3 | 21.16 | 453.6 | 4.18 | 80.4 | 5.318 | 0.51 | 0.64 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 21.2
|
|
| T16 T16 |
|
9 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_55
well-buried hydrophobics
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 4 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 321.5 · logP 3.28 · TPSA 30.9
|
49.8 | 0.64 | 1.3240 | -0.9612 | 2 | 15.90 | 321.5 | 3.28 | 30.9 | 4.806 | 0.65 | 0.46 | 0 | 0 | 0.92 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 4 protein contact clashes
|
|
| T16 T16 |
|
10 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_975
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 313.4 · logP 4.92 · TPSA 37.9
|
49.5 | 0.62 | 1.7107 | -1.0139 | 4 | 6.14 | 313.4 | 4.92 | 37.9 | 3.094 | 0.62 | 0.39 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash
|
|
| T16 T16 |
|
11 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z62457426
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 6 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 392.3 · logP 5.51 · TPSA 58.0
|
50.1 | 0.66 | 1.3197 | -0.9878 | 0 | 12.14 | 392.3 | 5.51 | 58.0 | 1.985 | 0.32 | 0.51 | 0 | 0 | 0.45 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 6 protein contact clashes
|
|
| T16 T16 |
|
12 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0823
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 24.9, geometry warning, and strain ΔE = 24.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 280.3 · logP 0.02 · TPSA 150.0
|
54.3 | 0.67 | 1.9998 | -1.2587 | 0 | 24.94 | 280.3 | 0.02 | 150.0 | 2.259 | 0.60 | 0.46 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 24.9
|
|
| T16 T16 |
|
13 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44089721
well-buried hydrophobics
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 291.4 · logP 2.08 · TPSA 37.6
|
48.9 | 0.54 | 2.4452 | -1.0863 | 1 | 8.48 | 291.4 | 2.08 | 37.6 | 3.756 | 0.73 | 0.27 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T16 T16 |
|
14 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1213671382
reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 308.3 · logP 3.05 · TPSA 90.9
|
48.9 | 0.69 | 1.9406 | -1.2367 | 6 | 8.98 | 308.3 | 3.05 | 90.9 | 2.340 | 0.58 | 0.31 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash
|
|
| T16 T16 |
|
15 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_102
well-buried hydrophobics
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 310.4 · logP 1.57 · TPSA 50.9
|
48.0 | 0.66 | 1.4129 | -1.0797 | 5 | 13.78 | 310.4 | 1.57 | 50.9 | 4.366 | 0.73 | 0.33 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 1 protein clash
|
|
| T16 T16 |
|
16 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1310
reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 308.3 · logP 1.95 · TPSA 80.0
|
49.8 | 0.58 | 1.9944 | -1.0051 | 6 | 8.62 | 308.3 | 1.95 | 80.0 | 2.211 | 0.70 | 0.46 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash
|
|
| T16 T16 |
|
17 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z123660746
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 20.9, geometry warning, and strain ΔE = 20.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 360.4 · logP 1.69 · TPSA 95.7
|
49.7 | 0.62 | 2.1061 | -1.0685 | 5 | 20.91 | 360.4 | 1.69 | 95.7 | 1.798 | 0.73 | 0.32 | 0 | 0 | 0.87 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 20.9
|
|
| T16 T16 |
|
18 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_217
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 309.4 · logP 1.57 · TPSA 95.2
|
47.4 | 0.30 | 4.4700 | -0.9957 | 1 | 14.42 | 309.4 | 1.57 | 95.2 | 3.537 | 0.70 | 0.74 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 3 protein clashes
|
|
| T16 T16 |
|
19 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_3158
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 17 clashes; 1 protein contact clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 463.5 · logP 7.09 · TPSA 48.5
|
47.6 | 0.59 | 1.3424 | -0.6333 | 7 | 7.15 | 463.5 | 7.09 | 48.5 | 2.120 | 0.36 | 0.72 | 0 | 0 | 0.28 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 17 clashes; 1 protein contact clash
|
|
| T16 T16 |
|
20 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_67
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes; high strain Δ 30.3, geometry warning, and strain ΔE = 30.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 264.8 · logP 2.57 · TPSA 52.6
|
45.9 | 0.54 | 2.7348 | -1.2739 | 3 | 30.29 | 264.8 | 2.57 | 52.6 | 2.882 | 0.76 | 0.38 | 0 | 0 | 0.89 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; high strain Δ 30.3
|
|
| T16 T16 |
|
21 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_172
well-buried hydrophobics, clean safety profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 364.5 · logP 1.34 · TPSA 30.3
|
46.3 | 0.42 | 3.1152 | -0.8545 | 4 | 12.25 | 364.5 | 1.34 | 30.3 | 5.445 | 0.76 | 0.63 | 0 | 0 | 0.85 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes
|
|
| T16 T16 |
|
22 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_326
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 362.5 · logP 2.96 · TPSA 45.9
|
45.2 | 0.50 | 2.7314 | -0.9299 | 0 | 14.39 | 362.5 | 2.96 | 45.9 | 5.010 | 0.59 | 0.46 | 0 | 0 | 0.82 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T16 T16 |
|
23 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_90
well-buried hydrophobics
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 5 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 347.5 · logP 3.81 · TPSA 30.9
|
48.2 | 0.65 | 1.3307 | -0.9547 | 4 | 17.57 | 347.5 | 3.81 | 30.9 | 4.718 | 0.65 | 0.46 | 0 | 0 | 0.90 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 5 protein contact clashes
|
|
| T16 T16 |
|
24 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_6
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 426.6 · logP 3.13 · TPSA 8.9
|
44.7 | 0.47 | 2.7269 | -0.7678 | 3 | 17.82 | 426.6 | 3.13 | 8.9 | 5.221 | 0.62 | 0.54 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash
|
|
| T16 T16 |
|
25 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_204
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 431.4 · logP 4.84 · TPSA 24.7
|
44.3 | 0.54 | 2.2803 | -0.8308 | 5 | 14.46 | 431.4 | 4.84 | 24.7 | 5.096 | 0.46 | 0.61 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash
|
|
| T16 T16 |
|
26 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC1_169
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 10 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 291.3 · logP 2.70 · TPSA 74.6
|
42.7 | 0.38 | 3.9393 | -1.0577 | 7 | 4.89 | 291.3 | 2.70 | 74.6 | 2.040 | 0.73 | 0.32 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 3 protein clashes
|
|
| T16 T16 |
|
27 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56950529
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 380.4 · logP 3.93 · TPSA 31.4
|
43.1 | 0.55 | 2.2651 | -0.9139 | 3 | 18.17 | 380.4 | 3.93 | 31.4 | 2.257 | 0.47 | 0.32 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 13 clashes; 1 protein clash
|
|
| T16 T16 |
|
28 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_328
Hydrophobic burial looks adequate: 25% exposed (6/24 atoms). No penalty flagged.
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 6 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 383.0 · logP 2.61 · TPSA 21.1
|
44.6 | 0.61 | 1.2960 | -0.8432 | 6 | 14.09 | 383.0 | 2.61 | 21.1 | 5.793 | 0.65 | 0.46 | 0 | 0 | 0.81 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 6 protein contact clashes
|
|
| T16 T16 |
|
29 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_496
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 419.5 · logP 4.38 · TPSA 71.7
|
39.6 | 0.28 | 4.0781 | -0.7097 | 2 | 11.26 | 419.5 | 4.38 | 71.7 | 3.566 | 0.40 | 0.59 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 2 protein clashes
|
|
| T16 T16 |
|
30 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_304
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 398.6 · logP 3.81 · TPSA 32.7
|
42.8 | 0.41 | 3.7637 | -0.9021 | 2 | 17.69 | 398.6 | 3.81 | 32.7 | 4.936 | 0.62 | 0.43 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 2 protein clashes
|
|
| T16 T16 |
|
31 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC120
52% of hydrophobic surface appears solvent-exposed (12/23 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Good docking score, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 15 clashes; 3 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 346.4 · logP 4.31 · TPSA 46.1
|
40.5 | 0.65 | 1.3129 | -0.9167 | 12 | 6.35 | 346.4 | 4.31 | 46.1 | 3.530 | 0.55 | 0.41 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 15 clashes; 3 protein contact clashes
|
|
| T16 T16 |
|
32 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_214
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 431.5 · logP 3.80 · TPSA 21.1
|
43.5 | 0.44 | 3.2224 | -0.8996 | 5 | 13.55 | 431.5 | 3.80 | 21.1 | 5.433 | 0.65 | 0.61 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes
|
|
| T16 T16 |
|
33 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_379
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 17 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 362.6 · logP 2.49 · TPSA 21.1
|
45.1 | 0.45 | 2.6942 | -0.8429 | 0 | 15.51 | 362.6 | 2.49 | 21.1 | 5.711 | 0.65 | 0.47 | 0 | 0 | 0.84 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 17 clashes; 1 protein clash
|
|
| T16 T16 |
|
34 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_10
clean safety profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 336.5 · logP 1.52 · TPSA 8.9
|
41.7 | 0.47 | 2.7421 | -0.9090 | 10 | 13.00 | 336.5 | 1.52 | 8.9 | 5.449 | 0.76 | 0.56 | 0 | 0 | 0.84 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T16 T16 |
|
35 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_163
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 347.5 · logP 3.38 · TPSA 19.9
|
43.4 | 0.44 | 3.2130 | -0.9066 | 4 | 14.75 | 347.5 | 3.38 | 19.9 | 4.897 | 0.65 | 0.47 | 0 | 0 | 0.90 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T16 T16 |
|
36 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC223
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 15 clashes; 4 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 404.9 · logP 2.13 · TPSA 77.8
|
33.6 | 0.23 | 5.3484 | -0.9012 | 9 | 17.10 | 404.9 | 2.13 | 77.8 | 3.011 | 0.55 | 0.41 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 4 protein clashes
|
|
| T16 T16 |
|
37 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_317
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 383.5 · logP 3.65 · TPSA 19.9
|
40.9 | 0.33 | 3.9478 | -0.8372 | 4 | 13.77 | 383.5 | 3.65 | 19.9 | 4.971 | 0.65 | 0.51 | 0 | 0 | 0.86 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T16 T16 |
|
38 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z28597610
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 336.4 · logP 4.64 · TPSA 51.2
|
51.6 | 0.57 | 1.8092 | -0.9460 | 1 | 13.62 | 336.4 | 4.64 | 51.2 | 2.275 | 0.62 | 0.51 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T16 T16 |
|
39 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_ACDS_26
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 434.2 · logP 4.55 · TPSA 59.2
|
50.3 | 0.66 | 1.6352 | -1.1616 | 3 | 15.41 | 434.2 | 4.55 | 59.2 | 2.985 | 0.43 | 0.77 | 0 | 0 | 0.42 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T16 T16 |
|
40 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_693
well-buried hydrophobics
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein contact clashes; moderate strain Δ 21.9, geometry warning, and strain ΔE = 21.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 386.4 · logP 2.41 · TPSA 81.4
|
50.4 | 0.68 | 0.8300 | -0.8687 | 4 | 21.89 | 386.4 | 2.41 | 81.4 | 3.446 | 0.58 | 0.59 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein contact clashes; moderate strain Δ 21.9
|
|
| T16 T16 |
|
41 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30879667
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 16 clashes; 4 protein contact clashes, geometry warning, and strain ΔE = 19.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 423.5 · logP 4.88 · TPSA 56.7
|
50.2 | 0.55 | 1.6832 | -0.7225 | 1 | 19.69 | 423.5 | 4.88 | 56.7 | 2.045 | 0.43 | 0.68 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 16 clashes; 4 protein contact clashes
|
|
| T16 T16 |
|
42 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z69130143
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 311.4 · logP 2.66 · TPSA 71.1
|
50.7 | 0.60 | 2.0223 | -1.0810 | 3 | 17.01 | 311.4 | 2.66 | 71.1 | 1.685 | 0.62 | 0.45 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash
|
|
| T16 T16 |
|
43 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_MV-35
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 1 protein clash; high strain Δ 32.8, geometry warning, and strain ΔE = 32.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 385.9 · logP 0.85 · TPSA 108.3
|
49.5 | 0.52 | 2.8940 | -0.9973 | 3 | 32.80 | 385.9 | 0.85 | 108.3 | 2.936 | 0.70 | 0.68 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 1 protein clash; high strain Δ 32.8
|
|
| T16 T16 |
|
44 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56774554
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 17 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 426.5 · logP 3.61 · TPSA 94.5
|
48.1 | 0.40 | 2.9340 | -0.7619 | 0 | 18.67 | 426.5 | 3.61 | 94.5 | 3.925 | 0.70 | 0.64 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 17 clashes; 1 protein clash
|
|
| T16 T16 |
|
45 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_179
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 351.4 · logP 2.96 · TPSA 110.0
|
47.7 | 0.48 | 2.9966 | -0.9832 | 0 | 17.39 | 351.4 | 2.96 | 110.0 | 3.231 | 0.55 | 0.52 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T16 T16 |
|
46 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45875055
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 9 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 433.6 · logP 1.84 · TPSA 71.1
|
48.1 | 0.52 | 2.0159 | -0.8118 | 1 | 16.50 | 433.6 | 1.84 | 71.1 | 2.193 | 0.67 | 0.41 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 12 clashes; 9 protein contact clashes
|
|
| T16 T16 |
|
47 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z133716394
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 20.3, geometry warning, and strain ΔE = 20.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 374.9 · logP 1.81 · TPSA 97.5
|
47.6 | 0.44 | 3.5612 | -1.0715 | 1 | 20.33 | 374.9 | 1.81 | 97.5 | 1.870 | 0.73 | 0.31 | 0 | 0 | 0.86 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 20.3
|
|
| T16 T16 |
|
48 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_98
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 1 protein clash; high strain Δ 33.4, geometry warning, and strain ΔE = 33.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 370.5 · logP 1.83 · TPSA 114.1
|
47.2 | 0.56 | 1.7814 | -0.8940 | 4 | 33.43 | 370.5 | 1.83 | 114.1 | 4.287 | 0.70 | 0.68 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 1 protein clash; high strain Δ 33.4
|
|
| T16 T16 |
|
49 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z226217786
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 23.8, geometry warning, and strain ΔE = 23.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 380.4 · logP 0.43 · TPSA 101.5
|
46.8 | 0.45 | 2.8763 | -0.8150 | 2 | 23.81 | 380.4 | 0.43 | 101.5 | 3.146 | 0.70 | 0.42 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 23.8
|
|
| T16 T16 |
|
50 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Babesia_59
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 371.4 · logP 2.53 · TPSA 103.8
|
46.3 | 0.51 | 2.4465 | -0.9056 | 2 | 14.70 | 371.4 | 2.53 | 103.8 | 2.915 | 0.58 | 0.36 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash
|
|
| T16 T16 |
|
51 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0822
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; high strain Δ 30.5, geometry warning, and strain ΔE = 30.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 281.3 · logP -0.26 · TPSA 144.0
|
52.1 | 0.64 | 2.0295 | -1.2291 | 0 | 30.55 | 281.3 | -0.26 | 144.0 | 2.358 | 0.60 | 0.46 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; high strain Δ 30.5
|
|
| T16 T16 |
|
52 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC1_11
well-buried hydrophobics
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein contact clash; moderate strain Δ 28.1, geometry warning, and strain ΔE = 28.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 432.3 · logP 5.84 · TPSA 43.2
|
46.4 | 0.65 | 0.9895 | -0.8322 | 2 | 28.11 | 432.3 | 5.84 | 43.2 | 3.334 | 0.28 | 0.64 | 0 | 0 | 0.39 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein contact clash; moderate strain Δ 28.1
|
|
| T16 T16 |
|
53 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0406
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 20.5, geometry warning, and strain ΔE = 20.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 327.4 · logP 0.46 · TPSA 144.0
|
49.3 | 0.56 | 2.6108 | -1.1193 | 0 | 20.46 | 327.4 | 0.46 | 144.0 | 2.569 | 0.53 | 0.58 | 0 | 0 | 0.36 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 20.5
|
|
| T16 T16 |
|
54 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_56
Hydrophobic burial looks adequate: 32% exposed (6/19 atoms). No penalty flagged.
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 20.8, geometry warning, and strain ΔE = 20.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 320.4 · logP 3.09 · TPSA 56.9
|
45.7 | 0.61 | 1.3468 | -0.9536 | 6 | 20.78 | 320.4 | 3.09 | 56.9 | 3.335 | 0.62 | 0.52 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 20.8
|
|
| T16 T16 |
|
55 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1541
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 23.7, geometry warning, and strain ΔE = 23.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 329.4 · logP 3.29 · TPSA 57.8
|
45.0 | 0.41 | 3.4867 | -0.9127 | 3 | 23.68 | 329.4 | 3.29 | 57.8 | 3.101 | 0.62 | 0.54 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 23.7
|
|
| T16 T16 |
|
56 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z29395256
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; high strain Δ 30.9, geometry warning, and strain ΔE = 30.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 325.4 · logP 3.79 · TPSA 57.8
|
45.5 | 0.62 | 1.7220 | -1.0885 | 5 | 30.86 | 325.4 | 3.79 | 57.8 | 2.481 | 0.62 | 0.43 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; high strain Δ 30.9
|
|
| T16 T16 |
|
57 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_169
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 14 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 425.5 · logP 3.31 · TPSA 108.1
|
43.6 | 0.49 | 2.5260 | -0.7877 | 9 | 18.37 | 425.5 | 3.31 | 108.1 | 2.209 | 0.58 | 0.58 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash
|
|
| T16 T16 |
|
58 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0411
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 21.6, geometry warning, and strain ΔE = 21.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 313.4 · logP 0.81 · TPSA 147.1
|
46.2 | 0.65 | 3.5532 | -1.6167 | 4 | 21.57 | 313.4 | 0.81 | 147.1 | 2.745 | 0.53 | 0.42 | 0 | 0 | 0.42 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 21.6
|
|
| T16 T16 |
|
59 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_78
41% of hydrophobic surface appears solvent-exposed (9/22 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Good docking score and good contact coverage.
Main concern: geometry warning; 12 clashes; 3 protein contact clashes; moderate strain Δ 21.5, geometry warning, and strain ΔE = 21.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 382.9 · logP 2.88 · TPSA 39.3
|
42.7 | 0.66 | 0.9746 | -0.8623 | 9 | 21.46 | 382.9 | 2.88 | 39.3 | 3.842 | 0.62 | 0.31 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 3 protein contact clashes; moderate strain Δ 21.5
|
|
| T16 T16 |
|
60 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0552
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 22.9, geometry warning, and strain ΔE = 22.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 280.3 · logP 0.02 · TPSA 150.0
|
46.9 | 0.52 | 3.5904 | -1.3189 | 0 | 22.87 | 280.3 | 0.02 | 150.0 | 2.351 | 0.53 | 0.45 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 22.9
|
|
| T16 T16 |
|
61 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2021_39
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 332.4 · logP 3.04 · TPSA 46.1
|
42.2 | 0.37 | 3.7000 | -0.9452 | 1 | 13.17 | 332.4 | 3.04 | 46.1 | 3.155 | 0.62 | 0.25 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes
|
|
| T16 T16 |
|
62 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_136
reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 24.8, geometry warning, and strain ΔE = 24.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 375.5 · logP 3.05 · TPSA 72.9
|
42.6 | 0.58 | 1.6380 | -0.9039 | 6 | 24.77 | 375.5 | 3.05 | 72.9 | 3.105 | 0.65 | 0.25 | 0 | 0 | 0.89 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 24.8
|
|
| T16 T16 |
|
63 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1134
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 342.4 · logP 2.86 · TPSA 71.2
|
43.1 | 0.42 | 3.4571 | -0.9268 | 5 | 16.31 | 342.4 | 2.86 | 71.2 | 3.087 | 0.62 | 0.43 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes
|
|
| T16 T16 |
|
64 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z46033750
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 352.4 · logP 3.94 · TPSA 76.0
|
43.2 | 0.53 | 2.1492 | -0.8864 | 9 | 16.73 | 352.4 | 3.94 | 76.0 | 2.395 | 0.73 | 0.29 | 0 | 0 | 0.82 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T16 T16 |
|
65 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_176
well-buried hydrophobics, clean safety profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 377.5 · logP 1.89 · TPSA 42.8
|
45.8 | 0.41 | 3.1793 | -0.8417 | 4 | 12.68 | 377.5 | 1.89 | 42.8 | 4.997 | 0.76 | 0.61 | 0 | 0 | 0.86 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T16 T16 |
|
66 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_189
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 15 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 372.5 · logP 4.26 · TPSA 49.4
|
40.4 | 0.51 | 2.1156 | -0.8181 | 8 | 12.44 | 372.5 | 4.26 | 49.4 | 2.334 | 0.43 | 0.45 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 1 protein clash
|
|
| T16 T16 |
|
67 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_72
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 479.3 · logP 4.12 · TPSA 16.5
|
42.0 | 0.49 | 2.9072 | -0.9619 | 2 | 13.05 | 479.3 | 4.12 | 16.5 | 4.821 | 0.32 | 0.61 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T16 T16 |
|
68 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_MV-36
40% of hydrophobic surface appears solvent-exposed (8/20 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 11 clashes; 1 protein clash; high strain Δ 38.1, geometry warning, and strain ΔE = 38.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 350.5 · logP -0.90 · TPSA 83.7
|
40.4 | 0.54 | 2.7893 | -1.0106 | 8 | 38.09 | 350.5 | -0.90 | 83.7 | 5.080 | 0.70 | 0.45 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash; high strain Δ 38.1
|
|
| T16 T16 |
|
69 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56765438
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 7 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 324.3 · logP 3.45 · TPSA 87.6
|
39.0 | 0.35 | 4.1717 | -0.9922 | 8 | 12.46 | 324.3 | 3.45 | 87.6 | 2.842 | 0.58 | 0.46 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
|
|
| T16 T16 |
|
70 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_323
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 390.4 · logP 4.15 · TPSA 19.9
|
41.2 | 0.42 | 3.2288 | -0.8884 | 2 | 13.48 | 390.4 | 4.15 | 19.9 | 4.765 | 0.46 | 0.47 | 0 | 0 | 0.83 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T16 T16 |
|
71 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_52
well-buried hydrophobics
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 5 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 361.6 · logP 4.20 · TPSA 30.9
|
48.0 | 0.63 | 1.6013 | -0.9598 | 0 | 17.87 | 361.6 | 4.20 | 30.9 | 4.703 | 0.46 | 0.45 | 0 | 0 | 0.87 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 5 protein contact clashes
|
|
| T16 T16 |
|
72 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_206
45% of hydrophobic surface appears solvent-exposed (10/22 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 404.4 · logP 3.43 · TPSA 33.5
|
40.1 | 0.48 | 2.7556 | -0.9070 | 10 | 11.53 | 404.4 | 3.43 | 33.5 | 4.744 | 0.65 | 0.52 | 0 | 0 | 0.81 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T16 T16 |
|
73 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56071437
reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 14 clashes; 3 protein contact clashes; moderate strain Δ 23.4, geometry warning, and strain ΔE = 23.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 500.5 · logP 5.50 · TPSA 87.3
|
37.1 | 0.63 | 1.3105 | -0.7543 | 8 | 23.45 | 500.5 | 5.50 | 87.3 | 2.274 | 0.08 | 0.57 | 0 | 0 | 0.47 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 14 clashes; 3 protein contact clashes; moderate strain Δ 23.4
|
|
| T16 T16 |
|
74 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_167
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 430.4 · logP 4.82 · TPSA 16.5
|
40.9 | 0.45 | 3.1734 | -0.9017 | 5 | 13.44 | 430.4 | 4.82 | 16.5 | 4.989 | 0.46 | 0.61 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes
|
|
| T16 T16 |
|
75 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_168
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 417.4 · logP 3.41 · TPSA 21.1
|
45.9 | 0.55 | 2.2641 | -1.0115 | 0 | 17.41 | 417.4 | 3.41 | 21.1 | 5.791 | 0.65 | 0.45 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T16 T16 |
|
76 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_150
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 348.5 · logP 2.10 · TPSA 21.1
|
45.6 | 0.51 | 2.2203 | -0.9558 | 0 | 16.85 | 348.5 | 2.10 | 21.1 | 5.768 | 0.65 | 0.47 | 0 | 0 | 0.85 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T16 T16 |
|
77 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_169
45% of hydrophobic surface appears solvent-exposed (10/22 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 391.4 · logP 2.87 · TPSA 21.1
|
39.6 | 0.46 | 2.9936 | -0.9269 | 10 | 12.02 | 391.4 | 2.87 | 21.1 | 5.231 | 0.65 | 0.54 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T16 T16 |
|
78 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_321
Hydrophobic burial looks adequate: 24% exposed (6/25 atoms). No penalty flagged.
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 7 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 430.4 · logP 5.07 · TPSA 19.9
|
40.5 | 0.59 | 1.5886 | -0.8291 | 6 | 14.81 | 430.4 | 5.07 | 19.9 | 4.655 | 0.35 | 0.46 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 7 protein contact clashes
|
|
| T16 T16 |
|
79 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_160
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 382.0 · logP 4.03 · TPSA 19.9
|
40.9 | 0.44 | 2.9742 | -0.8560 | 4 | 14.74 | 382.0 | 4.03 | 19.9 | 4.929 | 0.46 | 0.56 | 0 | 0 | 0.85 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T16 T16 |
|
80 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_ACDS_27
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 528.2 · logP 4.23 · TPSA 59.2
|
35.7 | 0.52 | 2.7068 | -1.0334 | 12 | 6.72 | 528.2 | 4.23 | 59.2 | 3.171 | 0.28 | 0.56 | 0 | 0 | 0.33 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T16 T16 |
|
81 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_27
Hydrophobic burial looks adequate: 25% exposed (6/24 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 417.4 · logP 3.41 · TPSA 21.1
|
41.2 | 0.48 | 2.5499 | -0.8571 | 6 | 14.82 | 417.4 | 3.41 | 21.1 | 5.484 | 0.65 | 0.46 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T16 T16 |
|
82 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_322
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 416.4 · logP 4.68 · TPSA 19.9
|
40.7 | 0.47 | 2.9193 | -0.9044 | 4 | 14.77 | 416.4 | 4.68 | 19.9 | 4.985 | 0.46 | 0.47 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T16 T16 |
|
83 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_233
clean safety profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 12 clashes; 2 protein clashes; moderate strain Δ 23.7, geometry warning, and strain ΔE = 23.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 377.6 · logP 1.25 · TPSA 24.3
|
36.9 | 0.42 | 3.1399 | -0.8445 | 13 | 23.71 | 377.6 | 1.25 | 24.3 | 5.406 | 0.76 | 0.63 | 0 | 0 | 0.83 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes; moderate strain Δ 23.7
|
|
| T16 T16 |
|
84 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_75
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 430.4 · logP 4.82 · TPSA 16.5
|
39.6 | 0.48 | 2.5169 | -0.8032 | 5 | 15.49 | 430.4 | 4.82 | 16.5 | 4.989 | 0.46 | 0.45 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T16 T16 |
|
85 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_159
Hydrophobic burial looks adequate: 24% exposed (6/25 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 11 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 430.4 · logP 5.07 · TPSA 19.9
|
37.6 | 0.49 | 2.3642 | -0.7831 | 6 | 15.35 | 430.4 | 5.07 | 19.9 | 4.633 | 0.35 | 0.46 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 11 protein contact clashes
|
|
| T16 T16 |
|
86 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_MAC_39
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 4 protein contact clashes; moderate strain Δ 26.3, geometry warning, and strain ΔE = 26.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 376.8 · logP 3.66 · TPSA 100.9
|
53.0 | 0.62 | 1.2580 | -0.8679 | 0 | 26.26 | 376.8 | 3.66 | 100.9 | 2.634 | 0.58 | 0.65 | 0 | 0 | 0.40 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 4 protein contact clashes; moderate strain Δ 26.3
|
|
| T16 T16 |
|
87 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44831334
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 5 protein contact clashes; moderate strain Δ 26.5, geometry warning, and strain ΔE = 26.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 374.4 · logP 3.31 · TPSA 106.3
|
50.2 | 0.58 | 1.6489 | -0.8307 | 3 | 26.53 | 374.4 | 3.31 | 106.3 | 2.214 | 0.55 | 0.65 | 0 | 0 | 0.39 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 5 protein contact clashes; moderate strain Δ 26.5
|
|
| T16 T16 |
|
88 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC2_12
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash; high strain Δ 31.3, geometry warning, and strain ΔE = 31.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 328.4 · logP 3.68 · TPSA 64.8
|
46.8 | 0.49 | 2.5080 | -0.9189 | 2 | 31.27 | 328.4 | 3.68 | 64.8 | 3.488 | 0.62 | 0.65 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash; high strain Δ 31.3
|
|
| T16 T16 |
|
89 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_66
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 490.0 · logP 3.32 · TPSA 102.1
|
46.0 | 0.59 | 1.1027 | -0.6698 | 5 | 17.59 | 490.0 | 3.32 | 102.1 | 3.404 | 0.44 | 0.68 | 0 | 0 | 0.43 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein contact clashes
|
|
| T16 T16 |
|
90 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_148
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 2 protein contact clashes; moderate strain Δ 21.1, geometry warning, and strain ΔE = 21.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 463.6 · logP 4.06 · TPSA 69.7
|
45.7 | 0.63 | 1.1010 | -0.7823 | 4 | 21.05 | 463.6 | 4.06 | 69.7 | 1.960 | 0.28 | 0.60 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 2 protein contact clashes; moderate strain Δ 21.1
|
|
| T16 T16 |
|
91 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z24132888
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 16 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 437.9 · logP 4.68 · TPSA 110.5
|
44.3 | 0.46 | 2.5427 | -0.7727 | 2 | 18.57 | 437.9 | 4.68 | 110.5 | 2.454 | 0.40 | 0.57 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 16 clashes; 1 protein clash
|
|
| T16 T16 |
|
92 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_93
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 5 protein contact clashes; high strain Δ 36.8, geometry warning, and strain ΔE = 36.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 361.4 · logP 3.55 · TPSA 74.2
|
44.1 | 0.60 | 1.2500 | -0.8968 | 4 | 36.82 | 361.4 | 3.55 | 74.2 | 2.708 | 0.62 | 0.41 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 5 protein contact clashes; high strain Δ 36.8
|
|
| T16 T16 |
|
93 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56920485
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 28.1, geometry warning, and strain ΔE = 28.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 348.4 · logP 1.17 · TPSA 92.0
|
43.2 | 0.34 | 4.2218 | -0.9640 | 4 | 28.10 | 348.4 | 1.17 | 92.0 | 3.762 | 0.70 | 0.63 | 0 | 0 | 0.50 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 28.1
|
|
| T16 T16 |
|
94 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_8
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 469.6 · logP 1.01 · TPSA 72.0
|
43.3 | 0.41 | 2.8124 | -0.7080 | 3 | 18.18 | 469.6 | 1.01 | 72.0 | 4.841 | 0.66 | 0.52 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash
|
|
| T16 T16 |
|
95 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_119
well-buried hydrophobics
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 343.5 · logP 2.11 · TPSA 65.5
|
43.7 | 0.56 | 1.8147 | -0.9644 | 4 | 18.07 | 343.5 | 2.11 | 65.5 | 3.696 | 0.62 | 0.33 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash
|
|
| T16 T16 |
|
96 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z87656593
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 24.5, geometry warning, and strain ΔE = 24.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 421.5 · logP 2.13 · TPSA 109.6
|
44.6 | 0.57 | 2.0832 | -0.9348 | 4 | 24.46 | 421.5 | 2.13 | 109.6 | 2.563 | 0.58 | 0.31 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 24.5
|
|
| T16 T16 |
|
97 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_28
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 18 clashes; 4 protein contact clashes; moderate strain Δ 21.0, geometry warning, and strain ΔE = 21.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 422.6 · logP 3.87 · TPSA 21.1
|
45.3 | 0.52 | 1.8550 | -0.7389 | 5 | 20.99 | 422.6 | 3.87 | 21.1 | 5.014 | 0.62 | 0.70 | 0 | 0 | 0.50 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 18 clashes; 4 protein contact clashes; moderate strain Δ 21.0
|
|
| T16 T16 |
|
98 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
GemmaOHDUnisi_36
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 385.4 · logP 4.86 · TPSA 82.7
|
43.0 | 0.43 | 3.1272 | -0.8692 | 6 | 13.98 | 385.4 | 4.86 | 82.7 | 2.457 | 0.51 | 0.62 | 0 | 0 | 0.35 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes
|
|
| T16 T16 |
|
99 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_97
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 3 protein clashes; moderate strain Δ 23.4, geometry warning, and strain ΔE = 23.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 411.5 · logP 3.53 · TPSA 94.5
|
44.8 | 0.30 | 4.1587 | -0.8476 | 0 | 23.42 | 411.5 | 3.53 | 94.5 | 3.083 | 0.55 | 0.77 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 3 protein clashes; moderate strain Δ 23.4
|
|
| T16 T16 |
|
100 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2876
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 27.8, geometry warning, and strain ΔE = 27.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 270.3 · logP 0.54 · TPSA 97.1
|
44.4 | 0.46 | 3.7732 | -1.2365 | 2 | 27.85 | 270.3 | 0.54 | 97.1 | 2.514 | 0.67 | 0.45 | 0 | 0 | 0.43 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 9 clashes; 3 protein clashes; moderate strain Δ 27.8
|
|
| T16 T16 |
|
101 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_128
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 25.7, geometry warning, and strain ΔE = 25.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 299.4 · logP 2.93 · TPSA 86.0
|
42.3 | 0.39 | 3.9238 | -1.1556 | 3 | 25.70 | 299.4 | 2.93 | 86.0 | 2.344 | 0.70 | 0.39 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 25.7
|
|
| T16 T16 |
|
102 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2021_44
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 1 protein clash; moderate strain Δ 28.9, geometry warning, and strain ΔE = 28.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 404.5 · logP 3.29 · TPSA 64.9
|
43.1 | 0.48 | 2.6303 | -0.7899 | 6 | 28.91 | 404.5 | 3.29 | 64.9 | 3.195 | 0.58 | 0.57 | 0 | 0 | 0.50 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 1 protein clash; moderate strain Δ 28.9
|
|
| T16 T16 |
|
103 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_303
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 398.6 · logP 3.42 · TPSA 29.4
|
44.3 | 0.47 | 2.7174 | -0.8372 | 1 | 17.05 | 398.6 | 3.42 | 29.4 | 5.146 | 0.62 | 0.42 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 1 protein clash
|
|
| T16 T16 |
|
104 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30953926
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash; high strain Δ 31.3, geometry warning, and strain ΔE = 31.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 405.5 · logP 3.24 · TPSA 69.7
|
41.7 | 0.49 | 2.6007 | -0.8267 | 9 | 31.30 | 405.5 | 3.24 | 69.7 | 2.070 | 0.65 | 0.45 | 0 | 0 | 0.83 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; high strain Δ 31.3
|
|
| T16 T16 |
|
105 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_60
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash; moderate strain Δ 26.2, geometry warning, and strain ΔE = 26.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 344.4 · logP 3.08 · TPSA 73.4
|
41.7 | 0.47 | 2.9145 | -0.9472 | 4 | 26.22 | 344.4 | 3.08 | 73.4 | 4.515 | 0.62 | 0.43 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash; moderate strain Δ 26.2
|
|
| T16 T16 |
|
106 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1675
38% of hydrophobic surface appears solvent-exposed (10/26 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 16 clashes; 1 protein clash; moderate strain Δ 21.4, geometry warning, and strain ΔE = 21.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 442.5 · logP 1.63 · TPSA 70.8
|
40.8 | 0.43 | 2.7559 | -0.7353 | 10 | 21.42 | 442.5 | 1.63 | 70.8 | 3.615 | 0.73 | 0.57 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 16 clashes; 1 protein clash; moderate strain Δ 21.4
|
|
| T16 T16 |
|
107 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0959
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 28.7, geometry warning, and strain ΔE = 28.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 403.5 · logP 2.03 · TPSA 144.0
|
44.1 | 0.43 | 3.3870 | -0.9248 | 0 | 28.75 | 403.5 | 2.03 | 144.0 | 2.431 | 0.39 | 0.73 | 0 | 0 | 0.28 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 28.7
|
|
| T16 T16 |
|
108 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z31413736
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 3 protein clashes; moderate strain Δ 25.0, geometry warning, and strain ΔE = 25.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 389.8 · logP 0.89 · TPSA 149.4
|
41.5 | 0.31 | 4.4157 | -1.0012 | 1 | 25.01 | 389.8 | 0.89 | 149.4 | 1.905 | 0.63 | 0.31 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 3 protein clashes; moderate strain Δ 25.0
|
|
| T16 T16 |
|
109 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_37
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 454.6 · logP 5.31 · TPSA 70.5
|
40.3 | 0.50 | 2.3107 | -0.7612 | 4 | 16.60 | 454.6 | 5.31 | 70.5 | 3.044 | 0.17 | 0.65 | 0 | 0 | 0.48 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash
|
|
| T16 T16 |
|
110 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0409
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 25.0, geometry warning, and strain ΔE = 25.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 313.4 · logP 0.40 · TPSA 146.9
|
47.1 | 0.62 | 2.9517 | -1.4334 | 0 | 24.99 | 313.4 | 0.40 | 146.9 | 2.609 | 0.53 | 0.38 | 0 | 0 | 0.41 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 25.0
|
|
| T16 T16 |
|
111 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0562
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 322.4 · logP 0.40 · TPSA 153.1
|
41.7 | 0.42 | 3.5855 | -1.0463 | 6 | 17.01 | 322.4 | 0.40 | 153.1 | 2.214 | 0.60 | 0.39 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 3 protein clashes
|
|
| T16 T16 |
|
112 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC234
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 15 clashes; 2 protein clashes; moderate strain Δ 25.7, geometry warning, and strain ΔE = 25.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 371.5 · logP 1.99 · TPSA 83.8
|
42.0 | 0.43 | 3.2898 | -0.8873 | 8 | 25.66 | 371.5 | 1.99 | 83.8 | 2.896 | 0.70 | 0.49 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 2 protein clashes; moderate strain Δ 25.7
|
|
| T16 T16 |
|
113 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC232
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 18 clashes; 2 protein clashes; high strain Δ 49.5, geometry warning, and strain ΔE = 49.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 400.5 · logP 1.49 · TPSA 87.0
|
44.6 | 0.40 | 3.5727 | -0.9089 | 1 | 49.52 | 400.5 | 1.49 | 87.0 | 3.022 | 0.66 | 0.65 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 18 clashes; 2 protein clashes; high strain Δ 49.5
|
|
| T16 T16 |
|
114 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_89
Hydrophobic burial looks adequate: 34% exposed (10/29 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 15 clashes; 2 protein contact clashes; moderate strain Δ 29.4, geometry warning, and strain ΔE = 29.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 461.7 · logP 1.98 · TPSA 40.0
|
39.1 | 0.53 | 1.4862 | -0.6935 | 10 | 29.44 | 461.7 | 1.98 | 40.0 | 4.956 | 0.70 | 0.51 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 2 protein contact clashes; moderate strain Δ 29.4
|
|
| T16 T16 |
|
115 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0566
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 20.4, geometry warning, and strain ΔE = 20.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 280.3 · logP 0.02 · TPSA 150.0
|
43.2 | 0.44 | 3.8197 | -1.2694 | 0 | 20.39 | 280.3 | 0.02 | 150.0 | 2.318 | 0.53 | 0.42 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 20.4
|
|
| T16 T16 |
|
116 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_132
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 474.6 · logP 3.63 · TPSA 93.5
|
44.9 | 0.44 | 2.6804 | -0.7117 | 3 | 18.14 | 474.6 | 3.63 | 93.5 | 2.097 | 0.44 | 0.64 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 1 protein clash
|
|
| T16 T16 |
|
117 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_211
Hydrophobic burial looks adequate: 30% exposed (7/23 atoms). No penalty flagged.
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 9 clashes; 1 protein clash; high strain Δ 41.7, geometry warning, and strain ΔE = 41.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 375.5 · logP 2.76 · TPSA 60.6
|
35.8 | 0.47 | 2.2474 | -0.8204 | 7 | 41.70 | 375.5 | 2.76 | 60.6 | 3.792 | 0.65 | 0.31 | 0 | 0 | 0.87 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; high strain Δ 41.7
|
|
| T16 T16 |
|
118 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY1004
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 28.7, geometry warning, and strain ΔE = 28.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 312.4 · logP 0.87 · TPSA 117.9
|
44.1 | 0.42 | 3.9041 | -1.1400 | 5 | 28.73 | 312.4 | 0.87 | 117.9 | 2.415 | 0.73 | 0.42 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 28.7
|
|
| T16 T16 |
|
119 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_153
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 404.4 · logP 4.39 · TPSA 37.0
|
40.0 | 0.39 | 3.4238 | -0.8687 | 2 | 13.60 | 404.4 | 4.39 | 37.0 | 4.799 | 0.46 | 0.45 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 2 protein clashes
|
|
| T16 T16 |
|
120 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_175
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 403.5 · logP 2.84 · TPSA 122.0
|
36.4 | 0.33 | 3.9618 | -0.7911 | 11 | 14.63 | 403.5 | 2.84 | 122.0 | 3.548 | 0.52 | 0.68 | 0 | 0 | 0.38 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 3 protein clashes
|
|
| T16 T16 |
|
121 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_157
Hydrophobic burial looks adequate: 22% exposed (6/27 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 16 clashes; 1 protein clash; moderate strain Δ 25.5, geometry warning, and strain ΔE = 25.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 422.6 · logP 3.55 · TPSA 43.1
|
41.4 | 0.42 | 3.0000 | -0.7362 | 6 | 25.52 | 422.6 | 3.55 | 43.1 | 4.999 | 0.65 | 0.57 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 16 clashes; 1 protein clash; moderate strain Δ 25.5
|
|
| T16 T16 |
|
122 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_4
40% of hydrophobic surface appears solvent-exposed (12/30 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Good docking score, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 10 clashes; 4 protein contact clashes; high strain Δ 31.5, geometry warning, and strain ΔE = 31.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 445.7 · logP 2.52 · TPSA 12.1
|
38.0 | 0.61 | 1.1134 | -0.7376 | 12 | 31.49 | 445.7 | 2.52 | 12.1 | 5.619 | 0.62 | 0.52 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 4 protein contact clashes; high strain Δ 31.5
|
|
| T16 T16 |
|
123 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_118
45% of hydrophobic surface appears solvent-exposed (10/22 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 390.4 · logP 3.90 · TPSA 16.5
|
40.8 | 0.47 | 2.9318 | -0.9339 | 10 | 12.76 | 390.4 | 3.90 | 16.5 | 4.721 | 0.65 | 0.61 | 0 | 0 | 0.81 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T16 T16 |
|
124 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_260
Hydrophobic burial looks adequate: 32% exposed (9/28 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 13 clashes; 1 protein clash; high strain Δ 46.9, geometry warning, and strain ΔE = 46.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 419.7 · logP 1.84 · TPSA 12.1
|
36.6 | 0.45 | 2.3441 | -0.7519 | 9 | 46.92 | 419.7 | 1.84 | 12.1 | 5.566 | 0.73 | 0.64 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 1 protein clash; high strain Δ 46.9
|
|
| T16 T16 |
|
125 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_71
well-buried hydrophobics, clean safety profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 2 protein clashes; moderate strain Δ 24.6, geometry warning, and strain ΔE = 24.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 382.5 · logP 1.58 · TPSA 39.5
|
40.1 | 0.37 | 3.5807 | -0.8772 | 4 | 24.62 | 382.5 | 1.58 | 39.5 | 5.082 | 0.76 | 0.37 | 0 | 0 | 0.82 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 2 protein clashes; moderate strain Δ 24.6
|
|
| T16 T16 |
|
126 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_272
Hydrophobic burial looks adequate: 29% exposed (8/28 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 12 clashes; 2 protein clashes; moderate strain Δ 22.4, geometry warning, and strain ΔE = 22.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 434.7 · logP 0.65 · TPSA 24.2
|
37.5 | 0.38 | 3.6418 | -0.7752 | 8 | 22.39 | 434.7 | 0.65 | 24.2 | 5.981 | 0.73 | 0.45 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes; moderate strain Δ 22.4
|
|
| T16 T16 |
|
127 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_330
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 3 protein clashes, geometry warning, and strain ΔE = 18.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 417.4 · logP 3.41 · TPSA 21.1
|
39.3 | 0.28 | 4.1216 | -0.8692 | 0 | 18.06 | 417.4 | 3.41 | 21.1 | 5.547 | 0.65 | 0.47 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 3 protein clashes
|
|
| T16 T16 |
|
128 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_382
Hydrophobic burial looks adequate: 24% exposed (6/25 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 362.5 · logP 3.54 · TPSA 24.7
|
40.1 | 0.39 | 3.4035 | -0.8650 | 6 | 16.68 | 362.5 | 3.54 | 24.7 | 5.286 | 0.65 | 0.52 | 0 | 0 | 0.86 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 2 protein clashes
|
|
| T16 T16 |
|
129 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_MV-42
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein clashes; high strain Δ 35.8, geometry warning, and strain ΔE = 35.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 364.5 · logP -0.59 · TPSA 83.7
|
41.2 | 0.35 | 4.2657 | -0.9644 | 1 | 35.78 | 364.5 | -0.59 | 83.7 | 5.083 | 0.70 | 0.45 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes; high strain Δ 35.8
|
|
| T16 T16 |
|
130 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_12
52% of hydrophobic surface appears solvent-exposed (13/25 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 431.5 · logP 3.36 · TPSA 8.9
|
37.0 | 0.46 | 3.0180 | -0.8801 | 13 | 13.10 | 431.5 | 3.36 | 8.9 | 5.721 | 0.65 | 0.61 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T16 T16 |
|
131 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_378
50% of hydrophobic surface appears solvent-exposed (13/26 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 13 clashes; 2 protein clashes; moderate strain Δ 25.4, geometry warning, and strain ΔE = 25.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 408.6 · logP 1.45 · TPSA 35.2
|
35.5 | 0.40 | 3.3584 | -0.7807 | 13 | 25.42 | 408.6 | 1.45 | 35.2 | 5.435 | 0.73 | 0.56 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes; moderate strain Δ 25.4
|
|
| T16 T16 |
|
132 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_238
45% of hydrophobic surface appears solvent-exposed (13/29 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Good docking score, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 14 clashes; 4 protein contact clashes; moderate strain Δ 27.8, geometry warning, and strain ΔE = 27.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 431.7 · logP 2.38 · TPSA 20.9
|
34.9 | 0.55 | 1.6024 | -0.7128 | 13 | 27.80 | 431.7 | 2.38 | 20.9 | 6.188 | 0.62 | 0.46 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 4 protein contact clashes; moderate strain Δ 27.8
|
|
| T16 T16 |
|
133 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_186
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 18 clashes; 5 protein contact clashes; moderate strain Δ 23.7, geometry warning, and strain ΔE = 23.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 502.7 · logP 1.49 · TPSA 41.2
|
32.3 | 0.44 | 2.1525 | -0.6296 | 17 | 23.73 | 502.7 | 1.49 | 41.2 | 5.817 | 0.70 | 0.68 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 18 clashes; 5 protein contact clashes; moderate strain Δ 23.7
|
|
| T16 T16 |
|
134 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_54
clean safety profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 15 clashes; 3 protein clashes; moderate strain Δ 23.3, geometry warning, and strain ΔE = 23.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 406.6 · logP 1.94 · TPSA 58.4
|
31.9 | 0.24 | 4.6481 | -0.8213 | 11 | 23.26 | 406.6 | 1.94 | 58.4 | 5.458 | 0.76 | 0.50 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 3 protein clashes; moderate strain Δ 23.3
|
|
| T16 T16 |
|
135 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_67
50% of hydrophobic surface appears solvent-exposed (12/24 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 485.3 · logP 5.74 · TPSA 16.5
|
30.6 | 0.48 | 3.0185 | -0.9089 | 12 | 14.56 | 485.3 | 5.74 | 16.5 | 5.157 | 0.20 | 0.61 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T16 T16 |
|
136 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56850314
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 27.9, geometry warning, and strain ΔE = 27.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 349.4 · logP 4.30 · TPSA 78.3
|
48.8 | 0.58 | 1.8738 | -0.9532 | 1 | 27.87 | 349.4 | 4.30 | 78.3 | 2.944 | 0.58 | 0.51 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 27.9
|
|
| T16 T16 |
|
137 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_83
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 3 protein clashes; moderate strain Δ 21.9, geometry warning, and strain ΔE = 21.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 325.4 · logP 0.72 · TPSA 103.1
|
46.4 | 0.40 | 3.8564 | -1.0361 | 4 | 21.86 | 325.4 | 0.72 | 103.1 | 3.918 | 0.66 | 0.80 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 3 protein clashes; moderate strain Δ 21.9
|
|
| T16 T16 |
|
138 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z25399134
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 23.9, geometry warning, and strain ΔE = 23.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 310.4 · logP 3.20 · TPSA 70.7
|
44.2 | 0.46 | 3.1496 | -1.0633 | 4 | 23.94 | 310.4 | 3.20 | 70.7 | 2.071 | 0.62 | 0.42 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 23.9
|
|
| T16 T16 |
|
139 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56911531
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes; high strain Δ 31.5, geometry warning, and strain ΔE = 31.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 347.4 · logP 2.81 · TPSA 90.3
|
46.2 | 0.60 | 2.2557 | -1.1221 | 4 | 31.53 | 347.4 | 2.81 | 90.3 | 2.994 | 0.58 | 0.51 | 0 | 0 | 0.50 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 2 protein clashes; high strain Δ 31.5
|
|
| T16 T16 |
|
140 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_3
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 26.5, geometry warning, and strain ΔE = 26.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 454.0 · logP 3.29 · TPSA 73.5
|
43.5 | 0.48 | 2.5340 | -0.8038 | 3 | 26.51 | 454.0 | 3.29 | 73.5 | 2.880 | 0.44 | 0.62 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 26.5
|
|
| T16 T16 |
|
141 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57325700
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 23.9, geometry warning, and strain ΔE = 23.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 343.4 · logP 4.54 · TPSA 59.4
|
44.3 | 0.44 | 2.9988 | -0.8853 | 4 | 23.93 | 343.4 | 4.54 | 59.4 | 2.830 | 0.62 | 0.51 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 23.9
|
|
| T16 T16 |
|
142 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1575277625
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; high strain Δ 32.1, geometry warning, and strain ΔE = 32.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 421.4 · logP 1.63 · TPSA 118.4
|
42.3 | 0.38 | 3.6100 | -0.8888 | 2 | 32.11 | 421.4 | 1.63 | 118.4 | 3.394 | 0.58 | 0.54 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; high strain Δ 32.1
|
|
| T16 T16 |
|
143 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_MAC_38
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 4 protein contact clashes; moderate strain Δ 27.2, geometry warning, and strain ΔE = 27.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 393.8 · logP 4.40 · TPSA 88.0
|
49.2 | 0.60 | 1.3669 | -0.8423 | 0 | 27.19 | 393.8 | 4.40 | 88.0 | 2.507 | 0.40 | 0.65 | 0 | 0 | 0.39 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 4 protein contact clashes; moderate strain Δ 27.2
|
|
| T16 T16 |
|
144 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z48973074
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 16 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 423.3 · logP 5.23 · TPSA 52.6
|
40.6 | 0.45 | 2.6373 | -0.8652 | 1 | 18.90 | 423.3 | 5.23 | 52.6 | 2.676 | 0.32 | 0.45 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 16 clashes; 1 protein clash
|
|
| T16 T16 |
|
145 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56771875
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 22.8, geometry warning, and strain ΔE = 22.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 361.8 · logP 2.94 · TPSA 89.0
|
41.0 | 0.42 | 3.6181 | -1.0136 | 5 | 22.85 | 361.8 | 2.94 | 89.0 | 2.149 | 0.58 | 0.31 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 22.8
|
|
| T16 T16 |
|
146 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_17
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 3 protein clashes; moderate strain Δ 26.6, geometry warning, and strain ΔE = 26.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 400.5 · logP 1.13 · TPSA 123.8
|
40.0 | 0.24 | 4.4216 | -0.8294 | 0 | 26.60 | 400.5 | 1.13 | 123.8 | 3.166 | 0.63 | 0.48 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 3 protein clashes; moderate strain Δ 26.6
|
|
| T16 T16 |
|
147 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0616
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 23.9, geometry warning, and strain ΔE = 23.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 423.5 · logP 2.15 · TPSA 147.0
|
43.1 | 0.38 | 3.6842 | -0.8867 | 2 | 23.94 | 423.5 | 2.15 | 147.0 | 2.658 | 0.45 | 0.65 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 23.9
|
|
| T16 T16 |
|
148 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z29324102
reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 6 clashes; 1 protein clash; high strain Δ 35.0, geometry warning, and strain ΔE = 35.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 394.5 · logP 2.55 · TPSA 82.6
|
44.1 | 0.56 | 2.0333 | -0.8827 | 7 | 34.98 | 394.5 | 2.55 | 82.6 | 2.279 | 0.62 | 0.46 | 0 | 0 | 0.84 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; high strain Δ 35.0
|
|
| T16 T16 |
|
149 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1741977105
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 20.1, geometry warning, and strain ΔE = 20.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 379.5 · logP 4.36 · TPSA 38.8
|
38.0 | 0.40 | 2.9896 | -0.8337 | 3 | 20.11 | 379.5 | 4.36 | 38.8 | 2.677 | 0.43 | 0.32 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 20.1
|
|
| T16 T16 |
|
150 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0976
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; high strain Δ 30.1, geometry warning, and strain ΔE = 30.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 388.5 · logP 2.45 · TPSA 117.9
|
46.4 | 0.35 | 3.7336 | -0.8904 | 0 | 30.10 | 388.5 | 2.45 | 117.9 | 2.252 | 0.58 | 0.70 | 0 | 0 | 0.44 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; high strain Δ 30.1
|
|
| T16 T16 |
|
151 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56174642
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein clashes; moderate strain Δ 26.7, geometry warning, and strain ΔE = 26.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 329.4 · logP 3.35 · TPSA 72.2
|
43.9 | 0.44 | 2.9944 | -0.9612 | 1 | 26.73 | 329.4 | 3.35 | 72.2 | 3.663 | 0.62 | 0.47 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes; moderate strain Δ 26.7
|
|
| T16 T16 |
|
152 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0555
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; high strain Δ 31.1, geometry warning, and strain ΔE = 31.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 296.3 · logP -0.68 · TPSA 170.0
|
45.6 | 0.56 | 3.2560 | -1.3584 | 0 | 31.13 | 296.3 | -0.68 | 170.0 | 2.520 | 0.53 | 0.42 | 0 | 0 | 0.47 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 6 clashes; 3 protein clashes; high strain Δ 31.1
|
|
| T16 T16 |
|
153 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0565
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; high strain Δ 30.4, geometry warning, and strain ΔE = 30.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 281.3 · logP 0.15 · TPSA 144.2
|
43.8 | 0.48 | 3.6275 | -1.2811 | 0 | 30.41 | 281.3 | 0.15 | 144.2 | 2.469 | 0.53 | 0.45 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 6 clashes; 3 protein clashes; high strain Δ 30.4
|
|
| T16 T16 |
|
154 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_265
Hydrophobic burial looks adequate: 32% exposed (10/31 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 15 clashes; 4 protein contact clashes; moderate strain Δ 24.0, geometry warning, and strain ΔE = 24.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 472.7 · logP 3.71 · TPSA 28.0
|
38.4 | 0.54 | 1.6160 | -0.6824 | 10 | 23.98 | 472.7 | 3.71 | 28.0 | 5.335 | 0.50 | 0.64 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 4 protein contact clashes; moderate strain Δ 24.0
|
|
| T16 T16 |
|
155 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0615
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 25.1, geometry warning, and strain ΔE = 25.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 417.5 · logP 2.07 · TPSA 144.0
|
42.2 | 0.40 | 3.3687 | -0.8520 | 1 | 25.15 | 417.5 | 2.07 | 144.0 | 2.457 | 0.39 | 0.73 | 0 | 0 | 0.26 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 25.1
|
|
| T16 T16 |
|
156 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_316
Hydrophobic burial looks adequate: 28% exposed (8/29 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 13 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 427.6 · logP 2.76 · TPSA 44.1
|
40.6 | 0.51 | 2.2052 | -0.8035 | 8 | 19.79 | 427.6 | 2.76 | 44.1 | 5.217 | 0.62 | 0.57 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 1 protein clash
|
|
| T16 T16 |
|
157 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_205
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 17 clashes; 1 protein clash; moderate strain Δ 22.4, geometry warning, and strain ΔE = 22.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 430.4 · logP 4.92 · TPSA 37.0
|
38.3 | 0.41 | 3.2337 | -0.8337 | 4 | 22.35 | 430.4 | 4.92 | 37.0 | 5.091 | 0.46 | 0.52 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 17 clashes; 1 protein clash; moderate strain Δ 22.4
|
|
| T16 T16 |
|
158 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_25
42% of hydrophobic surface appears solvent-exposed (10/24 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 349.5 · logP 3.21 · TPSA 16.5
|
40.4 | 0.46 | 2.9479 | -0.9097 | 10 | 13.45 | 349.5 | 3.21 | 16.5 | 4.694 | 0.65 | 0.61 | 0 | 0 | 0.87 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T16 T16 |
|
159 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_281
Hydrophobic burial looks adequate: 32% exposed (9/28 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 24.3, geometry warning, and strain ΔE = 24.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 418.6 · logP 3.31 · TPSA 19.7
|
35.1 | 0.40 | 3.2625 | -0.7519 | 9 | 24.34 | 418.6 | 3.31 | 19.7 | 5.545 | 0.62 | 0.42 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 24.3
|
|
| T16 T16 |
|
160 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_384
Hydrophobic burial looks adequate: 25% exposed (6/24 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 17 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 364.5 · logP 2.38 · TPSA 33.9
|
39.1 | 0.38 | 3.6080 | -0.8988 | 6 | 16.68 | 364.5 | 2.38 | 33.9 | 5.328 | 0.65 | 0.52 | 0 | 0 | 0.88 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 17 clashes; 2 protein clashes
|
|
| T16 T16 |
|
161 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC230
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; high strain Δ 36.5, geometry warning, and strain ΔE = 36.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 387.5 · logP -0.32 · TPSA 88.2
|
39.4 | 0.31 | 3.8948 | -0.8673 | 2 | 36.46 | 387.5 | -0.32 | 88.2 | 4.278 | 0.70 | 0.52 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; high strain Δ 36.5
|
|
| T16 T16 |
|
162 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_9
Hydrophobic burial looks adequate: 29% exposed (8/28 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 12 clashes; 2 protein clashes; high strain Δ 37.4, geometry warning, and strain ΔE = 37.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 419.7 · logP 1.98 · TPSA 12.1
|
37.9 | 0.39 | 3.4089 | -0.8155 | 8 | 37.37 | 419.7 | 1.98 | 12.1 | 5.383 | 0.73 | 0.61 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes; high strain Δ 37.4
|
|
| T16 T16 |
|
163 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_254
39% of hydrophobic surface appears solvent-exposed (12/31 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Good docking score, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 11 clashes; 3 protein contact clashes; moderate strain Δ 29.5, geometry warning, and strain ΔE = 29.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 459.7 · logP 2.77 · TPSA 12.1
|
36.6 | 0.60 | 0.9934 | -0.6714 | 12 | 29.51 | 459.7 | 2.77 | 12.1 | 5.733 | 0.58 | 0.47 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 3 protein contact clashes; moderate strain Δ 29.5
|
|
| T16 T16 |
|
164 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_119
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 375.5 · logP 4.01 · TPSA 37.0
|
37.1 | 0.35 | 3.6874 | -0.8257 | 5 | 15.02 | 375.5 | 4.01 | 37.0 | 5.008 | 0.46 | 0.52 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 2 protein clashes
|
|
| T16 T16 |
|
165 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_225
42% of hydrophobic surface appears solvent-exposed (14/33 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 16 clashes; 5 protein contact clashes; high strain Δ 33.0, geometry warning, and strain ΔE = 33.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 517.8 · logP 1.21 · TPSA 18.6
|
35.7 | 0.52 | 1.8768 | -0.6814 | 14 | 33.00 | 517.8 | 1.21 | 18.6 | 5.597 | 0.70 | 0.62 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 16 clashes; 5 protein contact clashes; high strain Δ 33.0
|
|
| T16 T16 |
|
166 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_ACDS_36
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 12 clashes; 8 protein contact clashes, geometry warning, and strain ΔE = 18.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 538.3 · logP 6.38 · TPSA 48.2
|
34.2 | 0.57 | 1.8291 | -0.9011 | 11 | 18.82 | 538.3 | 6.38 | 48.2 | 3.157 | 0.07 | 0.77 | 0 | 0 | 0.22 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 8 protein contact clashes
|
|
| T16 T16 |
|
167 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_7
52% of hydrophobic surface appears solvent-exposed (13/25 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 362.6 · logP 2.05 · TPSA 8.9
|
36.5 | 0.43 | 3.0355 | -0.8600 | 13 | 13.44 | 362.6 | 2.05 | 8.9 | 5.698 | 0.65 | 0.63 | 0 | 0 | 0.83 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T16 T16 |
|
168 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_230
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 12 clashes; 1 protein clash; high strain Δ 39.7, geometry warning, and strain ΔE = 39.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 475.7 · logP 0.25 · TPSA 16.6
|
37.0 | 0.47 | 2.2462 | -0.6756 | 10 | 39.66 | 475.7 | 0.25 | 16.6 | 6.579 | 0.70 | 0.65 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash; high strain Δ 39.7
|
|
| T16 T16 |
|
169 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_264
45% of hydrophobic surface appears solvent-exposed (14/31 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 16 clashes; 1 protein clash; moderate strain Δ 26.5, geometry warning, and strain ΔE = 26.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 488.7 · logP 1.05 · TPSA 32.4
|
32.0 | 0.41 | 2.7215 | -0.6596 | 14 | 26.48 | 488.7 | 1.05 | 32.4 | 6.033 | 0.73 | 0.46 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 16 clashes; 1 protein clash; moderate strain Δ 26.5
|
|
| T16 T16 |
|
170 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_209
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 430.4 · logP 4.92 · TPSA 37.0
|
35.4 | 0.29 | 4.4785 | -0.8658 | 4 | 14.58 | 430.4 | 4.92 | 37.0 | 5.091 | 0.46 | 0.48 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 3 protein clashes
|
|
| T16 T16 |
|
171 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_50
47% of hydrophobic surface appears solvent-exposed (15/32 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 16 clashes; 3 protein clashes; moderate strain Δ 27.5, geometry warning, and strain ΔE = 27.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 502.7 · logP 1.49 · TPSA 41.2
|
28.0 | 0.23 | 4.7112 | -0.6843 | 15 | 27.52 | 502.7 | 1.49 | 41.2 | 5.801 | 0.70 | 0.59 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 16 clashes; 3 protein clashes; moderate strain Δ 27.5
|
|
| T16 T16 |
|
172 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2022_22
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein clashes; moderate strain Δ 24.7, geometry warning, and strain ΔE = 24.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 418.5 · logP 1.60 · TPSA 126.5
|
42.1 | 0.37 | 3.2911 | -0.7589 | 5 | 24.71 | 418.5 | 1.60 | 126.5 | 3.557 | 0.63 | 0.65 | 0 | 0 | 0.41 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes; moderate strain Δ 24.7
|
|
| T16 T16 |
|
173 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56890899
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash; high strain Δ 32.8, geometry warning, and strain ΔE = 32.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 418.5 · logP 4.07 · TPSA 84.8
|
40.9 | 0.45 | 2.6360 | -0.7642 | 1 | 32.80 | 418.5 | 4.07 | 84.8 | 2.288 | 0.36 | 0.41 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash; high strain Δ 32.8
|
|
| T16 T16 |
|
174 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC2_68
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 21.7, geometry warning, and strain ΔE = 21.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 387.5 · logP 3.51 · TPSA 93.3
|
40.9 | 0.41 | 3.5108 | -0.9432 | 7 | 21.69 | 387.5 | 3.51 | 93.3 | 2.332 | 0.58 | 0.51 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 21.7
|
|
| T16 T16 |
|
175 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_66
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 14 clashes; 1 protein clash; moderate strain Δ 26.9, geometry warning, and strain ΔE = 26.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 458.5 · logP 3.20 · TPSA 65.5
|
39.8 | 0.43 | 2.6868 | -0.7274 | 8 | 26.85 | 458.5 | 3.20 | 65.5 | 2.663 | 0.44 | 0.77 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash; moderate strain Δ 26.9
|
|
| T16 T16 |
|
176 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_85
reasonable synthesis profile
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 3 clashes; 2 protein clashes; moderate strain Δ 26.8, geometry warning, and strain ΔE = 26.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 328.4 · logP 3.05 · TPSA 62.5
|
39.1 | 0.51 | 2.6602 | -1.0372 | 8 | 26.82 | 328.4 | 3.05 | 62.5 | 2.788 | 0.62 | 0.32 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 2 protein clashes; moderate strain Δ 26.8
|
|
| T16 T16 |
|
177 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK219
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 13 clashes; 7 protein contact clashes; moderate strain Δ 20.5, geometry warning, and strain ΔE = 20.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 437.5 · logP 4.28 · TPSA 100.6
|
37.6 | 0.49 | 1.8299 | -0.7197 | 11 | 20.54 | 437.5 | 4.28 | 100.6 | 3.480 | 0.48 | 0.68 | 0 | 0 | 0.50 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 7 protein contact clashes; moderate strain Δ 20.5
|
|
| T16 T16 |
|
178 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_404
40% of hydrophobic surface appears solvent-exposed (12/30 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support and good contact coverage.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 25.6 and strain ΔE = 25.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 466.7 · logP 6.30 · TPSA 63.6
|
36.3 | 0.44 | 2.2884 | -0.6788 | 12 | 25.61 | 466.7 | 6.30 | 63.6 | 5.379 | 0.40 | 0.38 | 0 | 0 | 0.50 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 25.6
|
|
| T16 T16 |
|
179 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z219578626
reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash; high strain Δ 37.0, geometry warning, and strain ΔE = 37.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 428.8 · logP 3.84 · TPSA 66.9
|
38.2 | 0.48 | 2.3936 | -0.7964 | 6 | 36.98 | 428.8 | 3.84 | 66.9 | 2.341 | 0.50 | 0.33 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; high strain Δ 37.0
|
|
| T16 T16 |
|
180 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0625
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; high strain Δ 32.1, geometry warning, and strain ΔE = 32.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 403.5 · logP 2.03 · TPSA 144.0
|
41.7 | 0.39 | 3.4110 | -0.8552 | 1 | 32.15 | 403.5 | 2.03 | 144.0 | 2.418 | 0.39 | 0.73 | 0 | 0 | 0.28 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 2 protein clashes; high strain Δ 32.1
|
|
| T16 T16 |
|
181 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_292
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 15 clashes; 3 protein contact clashes; moderate strain Δ 25.3, geometry warning, and strain ΔE = 25.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 460.0 · logP 4.64 · TPSA 46.8
|
35.5 | 0.51 | 1.5663 | -0.6930 | 10 | 25.25 | 460.0 | 4.64 | 46.8 | 3.492 | 0.28 | 0.70 | 0 | 0 | 0.42 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 3 protein contact clashes; moderate strain Δ 25.3
|
|
| T16 T16 |
|
182 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2021_34
well-buried hydrophobics
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 3 protein clashes; high strain Δ 46.3, geometry warning, and strain ΔE = 46.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 313.3 · logP 0.51 · TPSA 136.4
|
34.5 | 0.38 | 3.6819 | -1.1311 | 4 | 46.28 | 313.3 | 0.51 | 136.4 | 3.635 | 0.66 | 0.32 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 3 protein clashes; high strain Δ 46.3
|
|
| T16 T16 |
|
183 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_ACDS_48
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; high strain Δ 31.3, geometry warning, and strain ΔE = 31.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 579.3 · logP 6.35 · TPSA 77.8
|
37.3 | 0.48 | 2.0763 | -0.7662 | 4 | 31.27 | 579.3 | 6.35 | 77.8 | 2.749 | 0.07 | 0.81 | 0 | 0 | 0.22 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; high strain Δ 31.3
|
|
| T16 T16 |
|
184 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC235
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein clashes; high strain Δ 46.3, geometry warning, and strain ΔE = 46.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 385.5 · logP 2.38 · TPSA 83.8
|
42.6 | 0.40 | 3.5662 | -0.9636 | 1 | 46.26 | 385.5 | 2.38 | 83.8 | 2.905 | 0.58 | 0.64 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes; high strain Δ 46.3
|
|
| T16 T16 |
|
185 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_232
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 20 clashes; 8 protein contact clashes; high strain Δ 37.9, geometry warning, and strain ΔE = 37.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 531.8 · logP 0.74 · TPSA 35.7
|
35.8 | 0.36 | 2.8473 | -0.5965 | 9 | 37.94 | 531.8 | 0.74 | 35.7 | 5.556 | 0.70 | 0.70 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 20 clashes; 8 protein contact clashes; high strain Δ 37.9
|
|
| T16 T16 |
|
186 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_151
50% of hydrophobic surface appears solvent-exposed (12/24 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 430.4 · logP 3.96 · TPSA 33.5
|
37.4 | 0.43 | 3.1002 | -0.8679 | 12 | 12.34 | 430.4 | 3.96 | 33.5 | 5.042 | 0.65 | 0.59 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T16 T16 |
|
187 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC2_88
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 28.6, geometry warning, and strain ΔE = 28.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 489.7 · logP 4.72 · TPSA 67.6
|
35.4 | 0.38 | 3.4536 | -0.7045 | 4 | 28.57 | 489.7 | 4.72 | 67.6 | 4.789 | 0.28 | 0.62 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 28.6
|
|
| T16 T16 |
|
188 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0950
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 3 protein clashes; high strain Δ 55.7, geometry warning, and strain ΔE = 55.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 448.5 · logP 2.29 · TPSA 158.3
|
37.5 | 0.22 | 4.8425 | -0.7789 | 1 | 55.65 | 448.5 | 2.29 | 158.3 | 2.828 | 0.45 | 0.80 | 0 | 0 | 0.23 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 3 protein clashes; high strain Δ 55.7
|
|
| T16 T16 |
|
189 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56795021
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 4 protein clashes; moderate strain Δ 26.5, geometry warning, and strain ΔE = 26.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 333.4 · logP 3.25 · TPSA 85.3
|
33.5 | 0.18 | 5.3821 | -0.9071 | 5 | 26.50 | 333.4 | 3.25 | 85.3 | 3.864 | 0.58 | 0.46 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 4 protein clashes; moderate strain Δ 26.5
|
|
| T16 T16 |
|
190 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0624
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 3 protein clashes; high strain Δ 34.2, geometry warning, and strain ΔE = 34.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 395.5 · logP 2.16 · TPSA 144.0
|
37.1 | 0.25 | 4.6048 | -0.8721 | 0 | 34.18 | 395.5 | 2.16 | 144.0 | 2.694 | 0.42 | 0.65 | 0 | 0 | 0.45 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 3 protein clashes; high strain Δ 34.2
|
|
| T16 T16 |
|
191 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_ACDS_38
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes, geometry warning, and strain ΔE = 20.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 530.3 · logP 6.13 · TPSA 48.2
|
35.9 | 0.44 | 2.9645 | -0.8995 | 4 | 19.97 | 530.3 | 6.13 | 48.2 | 3.308 | 0.07 | 0.74 | 0 | 0 | 0.24 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T16 T16 |
|
192 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_ACDS_32
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 9 clashes; 2 protein clashes, geometry warning, and strain ΔE = 18.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 489.3 · logP 6.55 · TPSA 43.6
|
35.2 | 0.42 | 2.8099 | -0.8558 | 7 | 18.02 | 489.3 | 6.55 | 43.6 | 2.643 | 0.14 | 0.77 | 0 | 0 | 0.28 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T16 T16 |
|
193 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_170
52% of hydrophobic surface appears solvent-exposed (13/25 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 13 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 361.6 · logP 3.52 · TPSA 16.5
|
36.8 | 0.42 | 3.1917 | -0.8684 | 13 | 13.59 | 361.6 | 3.52 | 16.5 | 4.938 | 0.65 | 0.63 | 0 | 0 | 0.86 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes
|
|
| T16 T16 |
|
194 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_237
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash; high strain Δ 30.4, geometry warning, and strain ΔE = 30.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 445.7 · logP 2.77 · TPSA 20.9
|
39.5 | 0.43 | 2.7541 | -0.7246 | 5 | 30.45 | 445.7 | 2.77 | 20.9 | 5.901 | 0.62 | 0.56 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash; high strain Δ 30.4
|
|
| T16 T16 |
|
195 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OSA_Lib_280
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 3 protein clashes; moderate strain Δ 27.8, geometry warning, and strain ΔE = 27.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 433.7 · logP 2.67 · TPSA 24.3
|
34.6 | 0.28 | 4.7659 | -0.8828 | 4 | 27.80 | 433.7 | 2.67 | 24.3 | 5.586 | 0.62 | 0.42 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 3 protein clashes; moderate strain Δ 27.8
|
|
| T16 T16 |
|
196 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC225
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 14 clashes; 1 protein clash; moderate strain Δ 27.2, geometry warning, and strain ΔE = 27.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 419.0 · logP 2.52 · TPSA 77.8
|
38.6 | 0.50 | 2.6269 | -0.9165 | 9 | 27.20 | 419.0 | 2.52 | 77.8 | 3.011 | 0.55 | 0.46 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash; moderate strain Δ 27.2
|
|
| T16 T16 |
|
197 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_78
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 2 protein clashes; moderate strain Δ 25.6, geometry warning, and strain ΔE = 25.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 457.6 · logP 2.31 · TPSA 96.0
|
40.0 | 0.33 | 3.5811 | -0.7292 | 5 | 25.57 | 457.6 | 2.31 | 96.0 | 3.171 | 0.58 | 0.63 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 2 protein clashes; moderate strain Δ 25.6
|
|
| T16 T16 |
|
198 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_61
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: 3 protein clashes; high strain Δ 45.2 and strain ΔE = 45.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 773.1 · logP 7.32 · TPSA 188.1
|
37.6 | 0.31 | 3.5072 | -0.4761 | 4 | 45.19 | 773.1 | 7.32 | 188.1 | 5.235 | 0.20 | 0.64 | 0 | 0 | 0.12 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
3 protein clashes; high strain Δ 45.2
|
|
| T16 T16 |
|
199 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56958950
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; high strain Δ 42.5, geometry warning, and strain ΔE = 42.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 543.6 · logP 2.44 · TPSA 113.1
|
37.3 | 0.43 | 2.3763 | -0.6305 | 6 | 42.48 | 543.6 | 2.44 | 113.1 | 3.102 | 0.52 | 0.65 | 0 | 0 | 0.45 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 9 clashes; 1 protein clash; high strain Δ 42.5
|
|
| T16 T16 |
|
200 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0957
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 27.7, geometry warning, and strain ΔE = 27.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 417.5 · logP 2.31 · TPSA 145.0
|
41.3 | 0.39 | 3.5982 | -0.9224 | 1 | 27.65 | 417.5 | 2.31 | 145.0 | 3.134 | 0.39 | 0.80 | 0 | 0 | 0.23 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 27.7
|
Score composition ▼ show
Docking 28% · final rank, interaction-normalized score, raw docking score
Burial 18% · absolute exposed hydrophobic atom count (lower is better)
Strain 14% · strain delta, intra score, geometry sanity
Safety / ADMET 18% · ADMET score with hERG/AMES/DILI/bioaccumulation penalties — Pareto objective
Ecotoxicology 9% · fish/daphnia/algae LC50 classes + bioaccumulation + persistence — Pareto objective
Synthesis 10% · SA score when available, otherwise Fsp3 proxy
Native similarity 12% · contact and H-bond recall when a native reference exists
Diversity shortlist 0% · cached shortlist already includes the novelty-aware selection step
How ranking works: Pareto fronts are built from six default objectives — docking score, ligand efficiency, burial depth, strain energy, ADMET safety, and ecotoxicology (fish/daphnia/algae LC₅₀ + bioaccumulation + persistence). Front 1 contains non-dominated ligands: no other ligand beats them across all six objectives simultaneously. Inside each front, ligands are ordered by a compromise score with explicit penalties for PAINS, reactivity, toxicity alerts, geometry warnings, excluded poses, and artifact annotations. The top 200 are returned using a diversity-aware selection step.
Methodology ▼ show
1. Candidate definition. For each target we keep one best pose per ligand, so the shortlist is not inflated by many similar poses of the same compound.
2. Objective set. Each ligand is evaluated across docking quality, absolute nonpolar solvent exposure (`n_exposed`), conformational strain, native-like interaction similarity when a native reference exists, safety and ecotoxicology, synthesizability, and general developability indicators such as QED.
2a. SASA / burial source. `SASA: done` = cached FreeSASA metrics. `queued/running` = background worker scheduled. `failed` = worker failed. `missing` = no SASA cached yet.
3. Liability penalties. PAINS motifs, reactive groups, toxicity alerts, artifact annotations, geometry warnings, and excluded-pose flags reduce the compromise score and are shown explicitly.
4. Pareto ranking. Front 1 = non-dominated ligands (no other ligand is better in all objectives simultaneously). Lower front number = more balanced profile.
5. Missing SASA handling. Missing SASA lowers `Data completeness` to `Provisional` but does not automatically reject a ligand. Binding and geometry axes stay independent.
6. Compromise score. `100 × clamp(weighted positive − liability penalty − missing-data penalty)`. Weights: docking 28%, burial 18%, strain 14%, safety/ecotox 18%, synthesis 10%, native similarity 12% (when reference exists).
7. Component details. Docking = `final_rank_score` 55% + `score_inter_norm` 30% + raw `score` 15%. Strain = `strain_delta` 55% + `score_intra_norm` 30% + geometry sanity 15%.
8. Final shortlist. Top 50 per target taken front-by-front with diversity-aware selection — near-duplicate analogs do not dominate.
How to read the table. `Pareto` = non-dominated layer, `Compromise` = within-front ordering score, `n_exposed` = burial proxy (lower is better), `Strain dE` = conformational stress, colored dots = quick green/orange/red cue.
How to use selections. Mark compounds row-by-row, save to `Current`/`Temp`/`A/B/C` sets, export to SDF/XLSX/CSV, or send to downstream analysis pages.