L. infantum SIR2 · T11
L. infantum
Protein: Sirtuin 2 (NAD-dependent deacetylase)
Targets
1
each capped at 50 ligands
Best-pose candidates
652
one best pose per ligand per target
Synth metric
SA score
direct SA metric
Absolute burial proxy
n_exposed
absolute exposed hydrophobic atoms, not fraction
Pareto front 1
6
non-dominated ligands across all selected targets
Burial source
FreeSASA 200
Proxy 0 · Missing 0
Metrics coverage
Done 200
Pending 0 · Failed 0 · Missing 0
Diversity shortlist
Novelty 0.45
High novelty 200 · Close analogs 0
New vs legacy top 50
Added 3 · Dropped 3
Stayed 197 of 200 legacy picks
T11
Native
Front 1: 6
200 / 652 shortlisted
Best: ulfkktlib_3143 · score 66.3
Pareto layers observed: 11
Metrics: done 200 · pending 0 · failed 0 · missing 0
Diversity: novelty 0.45 · close analogs 0
New vs legacy: added 3 · dropped 3 · stayed 197/200
Added: Z2752015126, Z87656593, Z57695216
·
Dropped: MK151, MK215, NMT-TY0433
| Target | 2D | Rank | Pareto | Assessment | Ligand | Compromise | Docking | Final rank | Inter norm | n_exposed | Strain dE | MW | cLogP | TPSA | SA score | Safety | Native sim | PAINS | Reactive | QED | SASA | Flags | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| T11 T11 |
|
1 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_3143
strong docking, well-buried hydrophobics
DetailsWhy selected: Strong docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 1 protein clash.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 218.3 · logP -2.71 · TPSA 53.3
|
66.3 | 0.90 | 0.2579 | -1.9420 | 1 | 8.14 | 218.3 | -2.71 | 53.3 | 4.786 | 0.67 | 0.54 | 0 | 0 | 0.23 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, geometry warning; 4 clashes; 1 protein clash
|
|
| T11 T11 |
|
2 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z277559108
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: 3 protein clashes and strain ΔE = 18.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 222.3 · logP -0.86 · TPSA 115.0
|
65.2 | 0.66 | 2.4338 | -1.8157 | 1 | 18.92 | 222.3 | -0.86 | 115.0 | 2.461 | 0.73 | 0.66 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
3 protein clashes
|
|
| T11 T11 |
|
3 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2670801365
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 189.3 · logP 2.87 · TPSA 26.0
|
60.4 | 0.72 | 1.8258 | -1.8332 | 1 | 3.32 | 189.3 | 2.87 | 26.0 | 1.839 | 0.76 | 0.52 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 2 protein clashes
|
|
| T11 T11 |
|
4 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44305789
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 4 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 237.3 · logP 2.88 · TPSA 49.3
|
58.7 | 0.74 | 0.4170 | -1.3184 | 0 | 11.26 | 237.3 | 2.88 | 49.3 | 1.948 | 0.76 | 0.33 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 4 protein contact clashes
|
|
| T11 T11 |
|
5 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57170671
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 262.3 · logP 1.95 · TPSA 72.2
|
58.5 | 0.55 | 2.6818 | -1.3854 | 0 | 7.05 | 262.3 | 1.95 | 72.2 | 1.533 | 0.76 | 0.72 | 0 | 0 | 0.88 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T11 T11 |
|
6 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC89
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash and strain ΔE = 19.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 429.6 · logP 3.56 · TPSA 91.4
|
53.0 | 0.50 | 1.8406 | -0.7677 | 6 | 19.85 | 429.6 | 3.56 | 91.4 | 4.540 | 0.70 | 0.52 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 8 clashes; 1 protein clash
|
|
| T11 T11 |
|
7 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z275022726
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 2 clashes; 3 protein clashes.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 333.4 · logP 2.74 · TPSA 94.5
|
59.3 | 0.50 | 2.5970 | -1.1137 | 1 | 17.01 | 333.4 | 2.74 | 94.5 | 2.955 | 0.62 | 0.72 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 2 clashes; 3 protein clashes
|
|
| T11 T11 |
|
8 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_239
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 178.2 · logP 0.30 · TPSA 55.1
|
58.2 | 0.70 | 2.0832 | -1.8327 | 3 | 13.27 | 178.2 | 0.30 | 55.1 | 2.067 | 0.76 | 0.62 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T11 T11 |
|
9 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1037335854
well-buried hydrophobics, clean safety profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 281.1 · logP 2.43 · TPSA 59.3
|
54.5 | 0.59 | 2.5739 | -1.5193 | 0 | 16.75 | 281.1 | 2.43 | 59.3 | 3.685 | 0.76 | 0.58 | 0 | 0 | 0.83 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T11 T11 |
|
10 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z226217786
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 5 protein contact clashes; moderate strain Δ 22.4, geometry warning, and strain ΔE = 22.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 380.4 · logP 0.43 · TPSA 101.5
|
54.7 | 0.61 | 1.1142 | -0.9426 | 2 | 22.36 | 380.4 | 0.43 | 101.5 | 3.146 | 0.70 | 0.76 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 5 protein contact clashes; moderate strain Δ 22.4
|
|
| T11 T11 |
|
11 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z85934155
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 3 protein clashes; moderate strain Δ 20.1, geometry warning, and strain ΔE = 20.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 271.1 · logP 2.08 · TPSA 59.6
|
54.5 | 0.60 | 2.5566 | -1.6920 | 0 | 20.08 | 271.1 | 2.08 | 59.6 | 2.464 | 0.76 | 0.58 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 3 protein clashes; moderate strain Δ 20.1
|
|
| T11 T11 |
|
12 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z104497306
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 265.3 · logP 0.45 · TPSA 124.0
|
56.8 | 0.58 | 2.4434 | -1.4244 | 0 | 7.99 | 265.3 | 0.45 | 124.0 | 2.092 | 0.70 | 0.68 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T11 T11 |
|
13 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_83
well-buried hydrophobics
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 3 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 325.4 · logP 0.72 · TPSA 103.1
|
53.5 | 0.71 | 0.0689 | -1.0285 | 2 | 14.63 | 325.4 | 0.72 | 103.1 | 3.918 | 0.66 | 0.50 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 3 protein contact clashes
|
|
| T11 T11 |
|
14 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC249
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 297.3 · logP 1.72 · TPSA 83.0
|
53.8 | 0.57 | 1.6582 | -1.0810 | 1 | 13.18 | 297.3 | 1.72 | 83.0 | 2.860 | 0.73 | 0.58 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash
|
|
| T11 T11 |
|
15 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z25724937
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 2 clashes; 2 protein clashes; high strain Δ 30.2 and strain ΔE = 30.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 364.4 · logP 0.99 · TPSA 121.6
|
54.4 | 0.45 | 2.8177 | -0.9571 | 6 | 30.24 | 364.4 | 0.99 | 121.6 | 2.928 | 0.70 | 0.71 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 2 clashes; 2 protein clashes; high strain Δ 30.2
|
|
| T11 T11 |
|
16 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_101
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 1 protein clash; moderate strain Δ 20.5, geometry warning, and strain ΔE = 20.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 341.5 · logP 2.23 · TPSA 70.9
|
52.5 | 0.61 | 1.4294 | -1.0567 | 0 | 20.48 | 341.5 | 2.23 | 70.9 | 4.781 | 0.62 | 0.68 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 1 protein clash; moderate strain Δ 20.5
|
|
| T11 T11 |
|
17 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z147200608
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 7 protein contact clashes; moderate strain Δ 23.0, geometry warning, and strain ΔE = 23.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 301.3 · logP 1.30 · TPSA 113.8
|
53.1 | 0.66 | 0.5972 | -1.1476 | 2 | 23.02 | 301.3 | 1.30 | 113.8 | 2.474 | 0.70 | 0.53 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 7 protein contact clashes; moderate strain Δ 23.0
|
|
| T11 T11 |
|
18 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z27682747
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 296.4 · logP 1.58 · TPSA 89.3
|
55.4 | 0.56 | 2.2312 | -1.2825 | 1 | 8.69 | 296.4 | 1.58 | 89.3 | 1.830 | 0.73 | 0.62 | 0 | 0 | 0.90 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 2 protein clashes
|
|
| T11 T11 |
|
19 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2235487241
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 4 protein contact clashes; high strain Δ 31.5, geometry warning, and strain ΔE = 31.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 317.8 · logP 3.81 · TPSA 69.6
|
52.4 | 0.65 | 0.6057 | -1.1100 | 1 | 31.52 | 317.8 | 3.81 | 69.6 | 2.241 | 0.65 | 0.57 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 4 protein contact clashes; high strain Δ 31.5
|
|
| T11 T11 |
|
20 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45614013
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 312.4 · logP 1.13 · TPSA 106.3
|
56.8 | 0.52 | 2.8872 | -1.3320 | 0 | 11.94 | 312.4 | 1.13 | 106.3 | 1.643 | 0.73 | 0.74 | 0 | 0 | 0.88 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T11 T11 |
|
21 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57183373
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 286.2 · logP 2.28 · TPSA 111.1
|
51.8 | 0.42 | 3.4604 | -1.1515 | 0 | 8.34 | 286.2 | 2.28 | 111.1 | 2.375 | 0.66 | 0.69 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T11 T11 |
|
22 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z237576524
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 4 protein contact clashes; moderate strain Δ 23.4, geometry warning, and strain ΔE = 23.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 325.4 · logP 3.64 · TPSA 49.2
|
51.2 | 0.67 | 0.6452 | -1.0882 | 0 | 23.39 | 325.4 | 3.64 | 49.2 | 2.771 | 0.62 | 0.33 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 4 protein contact clashes; moderate strain Δ 23.4
|
|
| T11 T11 |
|
23 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_901
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 321.4 · logP 0.52 · TPSA 87.3
|
49.9 | 0.62 | 1.6448 | -1.2357 | 3 | 7.61 | 321.4 | 0.52 | 87.3 | 2.540 | 0.67 | 0.41 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 4 clashes; 1 protein clash
|
|
| T11 T11 |
|
24 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57300837
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 5 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 386.9 · logP 4.27 · TPSA 66.5
|
47.5 | 0.59 | 1.0384 | -0.9129 | 2 | 11.21 | 386.9 | 4.27 | 66.5 | 2.166 | 0.43 | 0.40 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 5 protein contact clashes
|
|
| T11 T11 |
|
25 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z966775152
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 254.2 · logP 2.41 · TPSA 86.5
|
53.9 | 0.49 | 3.0873 | -1.3254 | 0 | 12.77 | 254.2 | 2.41 | 86.5 | 2.109 | 0.70 | 0.70 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T11 T11 |
|
26 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45956756
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 263.3 · logP 3.82 · TPSA 53.4
|
54.1 | 0.54 | 2.0658 | -1.2244 | 1 | 10.41 | 263.3 | 3.82 | 53.4 | 2.238 | 0.73 | 0.66 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T11 T11 |
|
27 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC345
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 222.2 · logP -0.19 · TPSA 107.0
|
54.0 | 0.58 | 2.5392 | -1.5150 | 0 | 16.98 | 222.2 | -0.19 | 107.0 | 3.167 | 0.73 | 0.62 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 2 protein clashes
|
|
| T11 T11 |
|
28 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_164
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein contact clashes; moderate strain Δ 22.9, geometry warning, and strain ΔE = 22.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 337.4 · logP 2.44 · TPSA 106.8
|
52.5 | 0.66 | 0.5290 | -1.0613 | 0 | 22.86 | 337.4 | 2.44 | 106.8 | 2.764 | 0.58 | 0.53 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein contact clashes; moderate strain Δ 22.9
|
|
| T11 T11 |
|
29 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z48961169
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 7 protein contact clashes; moderate strain Δ 23.3, geometry warning, and strain ΔE = 23.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 402.5 · logP 3.23 · TPSA 74.1
|
51.4 | 0.61 | 1.1780 | -1.0252 | 2 | 23.32 | 402.5 | 3.23 | 74.1 | 2.868 | 0.62 | 0.65 | 0 | 0 | 0.83 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 7 protein contact clashes; moderate strain Δ 23.3
|
|
| T11 T11 |
|
30 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC232
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 3 protein contact clashes; high strain Δ 42.0, geometry warning, and strain ΔE = 42.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 400.5 · logP 1.49 · TPSA 87.0
|
50.3 | 0.58 | 0.9457 | -0.8686 | 2 | 42.01 | 400.5 | 1.49 | 87.0 | 3.022 | 0.66 | 0.70 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 3 protein contact clashes; high strain Δ 42.0
|
|
| T11 T11 |
|
31 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z133716394
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 374.9 · logP 1.81 · TPSA 97.5
|
52.8 | 0.49 | 2.9290 | -1.1861 | 2 | 12.08 | 374.9 | 1.81 | 97.5 | 1.870 | 0.73 | 0.62 | 0 | 0 | 0.86 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T11 T11 |
|
32 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2755722093
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 3 protein clashes; high strain Δ 32.5, geometry warning, and strain ΔE = 32.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 254.3 · logP 1.80 · TPSA 76.2
|
51.9 | 0.58 | 3.1917 | -1.7407 | 3 | 32.45 | 254.3 | 1.80 | 76.2 | 2.598 | 0.73 | 0.70 | 0 | 0 | 0.81 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 3 protein clashes; high strain Δ 32.5
|
|
| T11 T11 |
|
33 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56757587
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 318.1 · logP 4.52 · TPSA 61.6
|
50.6 | 0.49 | 3.1547 | -1.3374 | 0 | 17.12 | 318.1 | 4.52 | 61.6 | 2.376 | 0.65 | 0.52 | 0 | 0 | 0.84 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T11 T11 |
|
34 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56917368
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 3 protein clashes, geometry warning, and strain ΔE = 18.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 285.2 · logP 2.01 · TPSA 59.6
|
53.7 | 0.56 | 3.1470 | -1.6325 | 2 | 18.85 | 285.2 | 2.01 | 59.6 | 2.425 | 0.76 | 0.62 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 3 protein clashes
|
|
| T11 T11 |
|
35 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z55981969
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 250.3 · logP 1.17 · TPSA 78.1
|
52.0 | 0.45 | 3.8941 | -1.4612 | 0 | 13.33 | 250.3 | 1.17 | 78.1 | 3.190 | 0.73 | 0.66 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes
|
|
| T11 T11 |
|
36 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_82
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 324.4 · logP 3.33 · TPSA 64.3
|
49.7 | 0.46 | 2.5451 | -1.0309 | 1 | 10.53 | 324.4 | 3.33 | 64.3 | 2.416 | 0.65 | 0.58 | 0 | 0 | 0.94 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T11 T11 |
|
37 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z27749611
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 301.4 · logP 4.21 · TPSA 29.1
|
51.4 | 0.46 | 2.7846 | -1.0594 | 2 | 8.60 | 301.4 | 4.21 | 29.1 | 1.441 | 0.62 | 0.67 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes
|
|
| T11 T11 |
|
38 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_38
well-buried hydrophobics
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 3 protein contact clashes; moderate strain Δ 26.3, geometry warning, and strain ΔE = 26.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 340.8 · logP 4.00 · TPSA 50.2
|
49.3 | 0.62 | 0.7502 | -1.0078 | 1 | 26.28 | 340.8 | 4.00 | 50.2 | 3.575 | 0.62 | 0.48 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 3 protein contact clashes; moderate strain Δ 26.3
|
|
| T11 T11 |
|
39 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z53223394
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 312.4 · logP 0.32 · TPSA 118.0
|
53.1 | 0.54 | 2.4465 | -1.2718 | 1 | 14.72 | 312.4 | 0.32 | 118.0 | 2.865 | 0.73 | 0.62 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 2 protein clashes
|
|
| T11 T11 |
|
40 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_466
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 319.4 · logP 2.43 · TPSA 46.0
|
48.8 | 0.44 | 2.7280 | -0.9869 | 0 | 8.28 | 319.4 | 2.43 | 46.0 | 4.228 | 0.62 | 0.65 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T11 T11 |
|
41 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45614029
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 330.4 · logP 1.27 · TPSA 106.3
|
55.7 | 0.51 | 2.8930 | -1.2833 | 0 | 17.80 | 330.4 | 1.27 | 106.3 | 1.716 | 0.73 | 0.74 | 0 | 0 | 0.88 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T11 T11 |
|
42 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_38
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 5 protein contact clashes, geometry warning, and strain ΔE = 19.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 432.6 · logP 3.36 · TPSA 75.1
|
48.9 | 0.56 | 1.3601 | -0.8489 | 3 | 19.44 | 432.6 | 3.36 | 75.1 | 3.906 | 0.58 | 0.68 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 5 protein contact clashes
|
|
| T11 T11 |
|
43 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC323
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 291.4 · logP 1.06 · TPSA 85.1
|
51.3 | 0.51 | 2.8620 | -1.3262 | 3 | 9.86 | 291.4 | 1.06 | 85.1 | 1.854 | 0.70 | 0.58 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T11 T11 |
|
44 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30217191
native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 4 protein contact clashes; moderate strain Δ 29.0, geometry warning, and strain ΔE = 29.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 407.5 · logP 0.92 · TPSA 94.8
|
47.8 | 0.62 | 0.5259 | -0.8803 | 8 | 28.99 | 407.5 | 0.92 | 94.8 | 3.771 | 0.70 | 0.68 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 4 protein contact clashes; moderate strain Δ 29.0
|
|
| T11 T11 |
|
45 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z334929348
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 347.2 · logP 2.96 · TPSA 92.4
|
51.5 | 0.46 | 3.7745 | -1.3797 | 1 | 9.79 | 347.2 | 2.96 | 92.4 | 2.063 | 0.62 | 0.69 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
|
|
| T11 T11 |
|
46 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC2_34
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 29.9, geometry warning, and strain ΔE = 29.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 422.0 · logP 1.42 · TPSA 58.0
|
48.4 | 0.44 | 2.7241 | -0.8970 | 1 | 29.92 | 422.0 | 1.42 | 58.0 | 3.157 | 0.76 | 0.54 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 29.9
|
|
| T11 T11 |
|
47 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z116814534
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 410.5 · logP 2.53 · TPSA 86.4
|
47.4 | 0.46 | 2.3468 | -0.8241 | 2 | 11.22 | 410.5 | 2.53 | 86.4 | 2.119 | 0.58 | 0.46 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T11 T11 |
|
48 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30538241
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 28.0, geometry warning, and strain ΔE = 28.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 442.3 · logP 3.85 · TPSA 91.4
|
48.5 | 0.57 | 1.9544 | -1.0244 | 4 | 28.00 | 442.3 | 3.85 | 91.4 | 2.701 | 0.58 | 0.60 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 28.0
|
|
| T11 T11 |
|
49 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z31518712
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; high strain Δ 45.7, geometry warning, and strain ΔE = 45.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 267.3 · logP 2.82 · TPSA 67.0
|
49.4 | 0.58 | 1.3124 | -1.1830 | 2 | 45.67 | 267.3 | 2.82 | 67.0 | 2.002 | 0.73 | 0.58 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; high strain Δ 45.7
|
|
| T11 T11 |
|
50 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z73416904
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 442.5 · logP 0.80 · TPSA 121.5
|
52.1 | 0.51 | 2.1591 | -0.9014 | 2 | 18.53 | 442.5 | 0.80 | 121.5 | 2.271 | 0.63 | 0.75 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T11 T11 |
|
51 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_186
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 472.2 · logP 4.10 · TPSA 69.8
|
45.7 | 0.61 | 1.5069 | -1.1561 | 3 | 17.57 | 472.2 | 4.10 | 69.8 | 2.741 | 0.25 | 0.68 | 0 | 0 | 0.45 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash
|
|
| T11 T11 |
|
52 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19654250
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 20.2, geometry warning, and strain ΔE = 20.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 321.5 · logP 3.79 · TPSA 54.9
|
49.1 | 0.64 | 1.3724 | -1.2880 | 3 | 20.17 | 321.5 | 3.79 | 54.9 | 2.096 | 0.62 | 0.33 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 20.2
|
|
| T11 T11 |
|
53 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z608333022
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 7 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 375.4 · logP 4.73 · TPSA 79.5
|
47.8 | 0.53 | 1.6511 | -0.8811 | 3 | 13.78 | 375.4 | 4.73 | 79.5 | 1.747 | 0.40 | 0.69 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 7 protein contact clashes
|
|
| T11 T11 |
|
54 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_324
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 412.4 · logP 6.27 · TPSA 51.9
|
46.1 | 0.58 | 1.3033 | -0.9567 | 3 | 10.38 | 412.4 | 6.27 | 51.9 | 2.850 | 0.28 | 0.66 | 0 | 0 | 0.50 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 1 protein clash
|
|
| T11 T11 |
|
55 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC394
well-buried hydrophobics
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 8 protein contact clashes, geometry warning, and strain ΔE = 19.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 428.5 · logP 4.30 · TPSA 108.8
|
44.5 | 0.59 | 1.5252 | -1.0146 | 6 | 19.30 | 428.5 | 4.30 | 108.8 | 3.809 | 0.48 | 0.60 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 8 protein contact clashes
|
|
| T11 T11 |
|
56 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1621
reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 9 clashes; 3 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 374.4 · logP 2.87 · TPSA 67.2
|
44.4 | 0.60 | 0.7756 | -0.8482 | 12 | 10.45 | 374.4 | 2.87 | 67.2 | 2.672 | 0.62 | 0.52 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein contact clashes
|
|
| T11 T11 |
|
57 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57176222
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 302.2 · logP 1.99 · TPSA 131.4
|
50.3 | 0.42 | 3.7510 | -1.2181 | 0 | 9.81 | 302.2 | 1.99 | 131.4 | 2.545 | 0.63 | 0.66 | 0 | 0 | 0.43 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 3 protein clashes
|
|
| T11 T11 |
|
58 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_403
Hydrophobic burial looks adequate: 27% exposed (8/30 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 25.9 and strain ΔE = 25.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 468.7 · logP 6.09 · TPSA 66.8
|
41.3 | 0.35 | 3.4013 | -0.7424 | 8 | 25.91 | 468.7 | 6.09 | 66.8 | 5.436 | 0.40 | 0.60 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 25.9
|
|
| T11 T11 |
|
59 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_402
80% of hydrophobic surface is solvent-exposed (24/30 atoms). Large non-polar area without protein contacts incurs a desolvation penalty and will reduce binding affinity. Consider truncating or replacing the exposed fragment.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 24.7 and strain ΔE = 24.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 468.7 · logP 6.09 · TPSA 66.8
|
27.6 | 0.34 | 3.5444 | -0.7437 | 24 | 24.67 | 468.7 | 6.09 | 66.8 | 5.417 | 0.40 | 0.48 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 24.7
|
|
| T11 T11 |
|
60 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_3273
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 2 protein clashes; high strain Δ 66.9 and strain ΔE = 66.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 265.3 · logP -0.81 · TPSA 91.2
|
52.6 | 0.54 | 2.6294 | -1.3131 | 0 | 66.88 | 265.3 | -0.81 | 91.2 | 5.236 | 0.70 | 0.55 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 5 clashes; 2 protein clashes; high strain Δ 66.9
|
|
| T11 T11 |
|
61 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56785135
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 2 protein clashes; moderate strain Δ 23.1, geometry warning, and strain ΔE = 23.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 272.3 · logP 2.25 · TPSA 73.1
|
52.4 | 0.53 | 2.3505 | -1.2150 | 2 | 23.09 | 272.3 | 2.25 | 73.1 | 2.628 | 0.76 | 0.65 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 2 protein clashes; moderate strain Δ 23.1
|
|
| T11 T11 |
|
62 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49719002
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; high strain Δ 42.0, geometry warning, and strain ΔE = 42.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 280.7 · logP 1.69 · TPSA 110.9
|
50.5 | 0.53 | 2.8863 | -1.4123 | 0 | 41.96 | 280.7 | 1.69 | 110.9 | 2.708 | 0.70 | 0.65 | 0 | 0 | 0.39 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; high strain Δ 42.0
|
|
| T11 T11 |
|
63 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z803081352
well-buried hydrophobics
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 2 protein clashes; moderate strain Δ 25.2, geometry warning, and strain ΔE = 25.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 234.3 · logP -0.48 · TPSA 93.0
|
50.6 | 0.57 | 2.0981 | -1.3894 | 1 | 25.23 | 234.3 | -0.48 | 93.0 | 3.348 | 0.73 | 0.56 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 2 protein clashes; moderate strain Δ 25.2
|
|
| T11 T11 |
|
64 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1508915075
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 3 protein clashes; moderate strain Δ 22.2, geometry warning, and strain ΔE = 22.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 211.2 · logP 0.44 · TPSA 103.8
|
51.3 | 0.54 | 3.1537 | -1.5962 | 3 | 22.17 | 211.2 | 0.44 | 103.8 | 2.749 | 0.70 | 0.68 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 3 protein clashes; moderate strain Δ 22.2
|
|
| T11 T11 |
|
65 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_23
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 334.4 · logP 2.99 · TPSA 70.7
|
50.6 | 0.53 | 1.6938 | -0.9862 | 3 | 15.86 | 334.4 | 2.99 | 70.7 | 2.479 | 0.65 | 0.64 | 0 | 0 | 0.88 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash
|
|
| T11 T11 |
|
66 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z16042309
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 20.2, geometry warning, and strain ΔE = 20.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 355.9 · logP 3.86 · TPSA 61.1
|
49.5 | 0.50 | 2.7923 | -1.1839 | 0 | 20.23 | 355.9 | 3.86 | 61.1 | 2.544 | 0.62 | 0.57 | 0 | 0 | 0.45 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 20.2
|
|
| T11 T11 |
|
67 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK65
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 1 protein clash; moderate strain Δ 20.5, geometry warning, and strain ΔE = 20.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 338.5 · logP 4.01 · TPSA 79.4
|
50.3 | 0.58 | 1.5334 | -1.0952 | 5 | 20.53 | 338.5 | 4.01 | 79.4 | 3.189 | 0.70 | 0.69 | 0 | 0 | 0.47 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 1 protein clash; moderate strain Δ 20.5
|
|
| T11 T11 |
|
68 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_172
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 6 protein contact clashes; moderate strain Δ 28.3, geometry warning, and strain ΔE = 28.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 476.6 · logP 1.81 · TPSA 79.7
|
49.9 | 0.53 | 1.3626 | -0.7800 | 1 | 28.29 | 476.6 | 1.81 | 79.7 | 3.890 | 0.70 | 0.63 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 6 protein contact clashes; moderate strain Δ 28.3
|
|
| T11 T11 |
|
69 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_128
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 21.1, geometry warning, and strain ΔE = 21.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 299.4 · logP 2.93 · TPSA 86.0
|
49.6 | 0.47 | 3.2282 | -1.2673 | 1 | 21.05 | 299.4 | 2.93 | 86.0 | 2.344 | 0.70 | 0.55 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 21.1
|
|
| T11 T11 |
|
70 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TbNat_134
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 286.2 · logP 1.09 · TPSA 108.0
|
50.9 | 0.40 | 3.8838 | -1.2417 | 0 | 11.13 | 286.2 | 1.09 | 108.0 | 3.205 | 0.73 | 0.69 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein clashes
|
|
| T11 T11 |
|
71 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49596635
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 11 protein contact clashes; moderate strain Δ 21.6, geometry warning, and strain ΔE = 21.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 403.5 · logP 1.57 · TPSA 108.3
|
50.1 | 0.45 | 2.1071 | -0.8463 | 0 | 21.65 | 403.5 | 1.57 | 108.3 | 2.216 | 0.70 | 0.61 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 11 protein contact clashes; moderate strain Δ 21.6
|
|
| T11 T11 |
|
72 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44868759
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes, geometry warning, and strain ΔE = 18.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 331.2 · logP 2.90 · TPSA 76.5
|
48.9 | 0.43 | 3.6341 | -1.2121 | 0 | 18.47 | 331.2 | 2.90 | 76.5 | 2.857 | 0.58 | 0.66 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein clashes
|
|
| T11 T11 |
|
73 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_626
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 21.9, geometry warning, and strain ΔE = 21.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 343.5 · logP 1.71 · TPSA 110.9
|
51.7 | 0.48 | 2.7827 | -1.1962 | 1 | 21.87 | 343.5 | 1.71 | 110.9 | 2.415 | 0.73 | 0.68 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 21.9
|
|
| T11 T11 |
|
74 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56811143
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 423.9 · logP 3.53 · TPSA 75.3
|
49.8 | 0.49 | 2.4745 | -0.9789 | 0 | 19.52 | 423.9 | 3.53 | 75.3 | 2.288 | 0.55 | 0.63 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T11 T11 |
|
75 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC325
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 321.4 · logP 0.65 · TPSA 86.0
|
49.8 | 0.53 | 2.0996 | -1.1388 | 2 | 11.32 | 321.4 | 0.65 | 86.0 | 2.740 | 0.70 | 0.47 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T11 T11 |
|
76 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z18509545
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 4 protein contact clashes; moderate strain Δ 28.9, geometry warning, and strain ΔE = 28.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 410.5 · logP 2.78 · TPSA 84.9
|
47.5 | 0.56 | 1.1076 | -0.8208 | 4 | 28.87 | 410.5 | 2.78 | 84.9 | 2.948 | 0.55 | 0.66 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 4 protein contact clashes; moderate strain Δ 28.9
|
|
| T11 T11 |
|
77 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z27682886
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 308.3 · logP 1.65 · TPSA 89.3
|
51.6 | 0.41 | 3.4616 | -1.1636 | 1 | 15.81 | 308.3 | 1.65 | 89.3 | 1.626 | 0.73 | 0.72 | 0 | 0 | 0.90 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T11 T11 |
|
78 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z235511374
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; high strain Δ 40.3, geometry warning, and strain ΔE = 40.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 331.4 · logP 3.44 · TPSA 75.1
|
47.7 | 0.59 | 1.3649 | -1.1500 | 2 | 40.25 | 331.4 | 3.44 | 75.1 | 2.294 | 0.58 | 0.55 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; high strain Δ 40.3
|
|
| T11 T11 |
|
79 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z116484872
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 307.4 · logP 3.02 · TPSA 67.0
|
48.4 | 0.49 | 2.5337 | -1.0654 | 5 | 13.98 | 307.4 | 3.02 | 67.0 | 1.794 | 0.62 | 0.64 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T11 T11 |
|
80 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z88883573
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 316.4 · logP 2.68 · TPSA 75.3
|
47.7 | 0.50 | 2.4119 | -1.1106 | 1 | 19.08 | 316.4 | 2.68 | 75.3 | 1.984 | 0.62 | 0.37 | 0 | 0 | 0.91 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T11 T11 |
|
81 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z237462396
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 316.3 · logP 2.46 · TPSA 85.6
|
46.3 | 0.34 | 3.7691 | -0.9963 | 1 | 10.49 | 316.3 | 2.46 | 85.6 | 2.090 | 0.58 | 0.61 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T11 T11 |
|
82 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1303983567
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 347.4 · logP 2.72 · TPSA 52.7
|
45.2 | 0.47 | 2.3884 | -0.9708 | 2 | 8.31 | 347.4 | 2.72 | 52.7 | 2.700 | 0.65 | 0.24 | 0 | 0 | 0.92 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T11 T11 |
|
83 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_217
well-buried hydrophobics
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 25.3, geometry warning, and strain ΔE = 25.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 309.4 · logP 1.57 · TPSA 95.2
|
45.6 | 0.46 | 2.6388 | -1.0465 | 0 | 25.25 | 309.4 | 1.57 | 95.2 | 3.537 | 0.70 | 0.35 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 25.3
|
|
| T11 T11 |
|
84 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC275
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 299.3 · logP 2.74 · TPSA 71.2
|
45.4 | 0.54 | 1.5893 | -1.0732 | 8 | 14.40 | 299.3 | 2.74 | 71.2 | 2.156 | 0.73 | 0.40 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash
|
|
| T11 T11 |
|
85 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19456393
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 8 protein contact clashes; moderate strain Δ 25.9, geometry warning, and strain ΔE = 25.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 427.5 · logP 4.13 · TPSA 79.0
|
44.4 | 0.56 | 1.2367 | -0.8748 | 3 | 25.89 | 427.5 | 4.13 | 79.0 | 3.209 | 0.36 | 0.65 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 8 protein contact clashes; moderate strain Δ 25.9
|
|
| T11 T11 |
|
86 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30857987
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 352.8 · logP 1.89 · TPSA 89.3
|
48.6 | 0.47 | 2.7158 | -1.1031 | 4 | 9.77 | 352.8 | 1.89 | 89.3 | 1.746 | 0.70 | 0.51 | 0 | 0 | 0.83 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T11 T11 |
|
87 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56175984
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 15 clashes; 5 protein contact clashes; moderate strain Δ 28.4, geometry warning, and strain ΔE = 28.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 410.3 · logP 5.20 · TPSA 71.2
|
44.1 | 0.55 | 1.5973 | -0.9638 | 2 | 28.41 | 410.3 | 5.20 | 71.2 | 2.912 | 0.28 | 0.68 | 0 | 0 | 0.48 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 15 clashes; 5 protein contact clashes; moderate strain Δ 28.4
|
|
| T11 T11 |
|
88 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TbNat_133
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 344.3 · logP 2.08 · TPSA 106.2
|
46.6 | 0.40 | 3.1419 | -0.9634 | 3 | 12.50 | 344.3 | 2.08 | 106.2 | 4.172 | 0.73 | 0.61 | 0 | 0 | 0.82 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T11 T11 |
|
89 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z29514151
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 456.5 · logP 2.59 · TPSA 89.3
|
44.3 | 0.36 | 3.1900 | -0.7689 | 3 | 13.15 | 456.5 | 2.59 | 89.3 | 2.417 | 0.55 | 0.60 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T11 T11 |
|
90 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z275022626
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 24.7, geometry warning, and strain ΔE = 24.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 398.5 · logP 4.85 · TPSA 67.8
|
46.5 | 0.54 | 1.9722 | -1.0811 | 2 | 24.70 | 398.5 | 4.85 | 67.8 | 2.118 | 0.43 | 0.65 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 24.7
|
|
| T11 T11 |
|
91 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45612906
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 394.5 · logP 5.38 · TPSA 59.1
|
44.6 | 0.45 | 2.4773 | -0.9057 | 1 | 16.31 | 394.5 | 5.38 | 59.1 | 1.934 | 0.32 | 0.66 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T11 T11 |
|
92 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45925616
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 406.9 · logP 5.83 · TPSA 62.2
|
43.4 | 0.40 | 3.1563 | -0.9148 | 2 | 11.11 | 406.9 | 5.83 | 62.2 | 2.301 | 0.28 | 0.74 | 0 | 0 | 0.42 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T11 T11 |
|
93 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44349751
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 361.8 · logP 2.53 · TPSA 113.0
|
43.4 | 0.27 | 4.6642 | -1.0077 | 3 | 11.65 | 361.8 | 2.53 | 113.0 | 2.083 | 0.62 | 0.61 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T11 T11 |
|
94 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57300846
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 5 protein contact clashes; high strain Δ 30.4, geometry warning, and strain ΔE = 30.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 409.5 · logP 3.58 · TPSA 95.6
|
47.6 | 0.56 | 1.2697 | -0.9161 | 4 | 30.38 | 409.5 | 3.58 | 95.6 | 2.189 | 0.58 | 0.63 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 5 protein contact clashes; high strain Δ 30.4
|
|
| T11 T11 |
|
95 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z29466466
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 13 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 422.5 · logP 2.97 · TPSA 93.7
|
41.3 | 0.39 | 3.0349 | -0.7999 | 9 | 15.78 | 422.5 | 2.97 | 93.7 | 2.846 | 0.55 | 0.67 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 1 protein clash
|
|
| T11 T11 |
|
96 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK217
well-buried hydrophobics
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 8 protein contact clashes; moderate strain Δ 20.7, geometry warning, and strain ΔE = 20.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 426.5 · logP 4.61 · TPSA 95.7
|
44.4 | 0.56 | 1.6344 | -0.9517 | 5 | 20.67 | 426.5 | 4.61 | 95.7 | 3.566 | 0.48 | 0.60 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 8 protein contact clashes; moderate strain Δ 20.7
|
|
| T11 T11 |
|
97 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49597035
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 437.9 · logP 2.22 · TPSA 108.3
|
47.8 | 0.44 | 2.5622 | -0.8632 | 1 | 18.98 | 437.9 | 2.22 | 108.3 | 2.302 | 0.58 | 0.61 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash
|
|
| T11 T11 |
|
98 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Babesia_33
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 13 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 338.8 · logP 4.07 · TPSA 62.2
|
39.9 | 0.46 | 2.6603 | -0.9914 | 13 | 13.21 | 338.8 | 4.07 | 62.2 | 2.359 | 0.62 | 0.52 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 1 protein clash
|
|
| T11 T11 |
|
99 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_709
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 17 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 414.9 · logP 5.09 · TPSA 51.1
|
40.0 | 0.39 | 3.1160 | -0.8377 | 6 | 10.10 | 414.9 | 5.09 | 51.1 | 2.060 | 0.32 | 0.63 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 17 clashes; 1 protein clash
|
|
| T11 T11 |
|
100 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z55982019
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 3 protein clashes; moderate strain Δ 22.3, geometry warning, and strain ΔE = 22.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 256.7 · logP 1.89 · TPSA 68.9
|
52.4 | 0.53 | 3.2087 | -1.5736 | 3 | 22.34 | 256.7 | 1.89 | 68.9 | 2.283 | 0.76 | 0.70 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 3 protein clashes; moderate strain Δ 22.3
|
|
| T11 T11 |
|
101 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0775
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 28.2, geometry warning, and strain ΔE = 28.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 322.4 · logP 0.40 · TPSA 153.1
|
51.1 | 0.51 | 2.2908 | -1.0948 | 1 | 28.19 | 322.4 | 0.40 | 153.1 | 2.221 | 0.60 | 0.78 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 28.2
|
|
| T11 T11 |
|
102 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49725613
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 328.8 · logP 3.41 · TPSA 59.9
|
49.1 | 0.49 | 2.1484 | -1.0306 | 3 | 17.01 | 328.8 | 3.41 | 59.9 | 2.323 | 0.65 | 0.64 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash
|
|
| T11 T11 |
|
103 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44425700
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 22.9, geometry warning, and strain ΔE = 22.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 295.3 · logP 2.21 · TPSA 77.2
|
48.3 | 0.40 | 3.2450 | -1.0843 | 1 | 22.90 | 295.3 | 2.21 | 77.2 | 2.214 | 0.70 | 0.66 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 22.9
|
|
| T11 T11 |
|
104 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TB2021_39
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 332.4 · logP 3.04 · TPSA 46.1
|
48.2 | 0.46 | 2.4540 | -0.9782 | 1 | 18.18 | 332.4 | 3.04 | 46.1 | 3.155 | 0.62 | 0.65 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T11 T11 |
|
105 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_85
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash; high strain Δ 46.5, geometry warning, and strain ΔE = 46.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 322.3 · logP 3.78 · TPSA 85.5
|
47.4 | 0.49 | 2.2655 | -1.0292 | 0 | 46.54 | 322.3 | 3.78 | 85.5 | 2.506 | 0.58 | 0.68 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash; high strain Δ 46.5
|
|
| T11 T11 |
|
106 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45359950
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 428.6 · logP 2.62 · TPSA 74.8
|
48.8 | 0.49 | 2.2043 | -0.9469 | 2 | 18.91 | 428.6 | 2.62 | 74.8 | 2.247 | 0.58 | 0.62 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash
|
|
| T11 T11 |
|
107 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2000
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 17 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 415.4 · logP 2.41 · TPSA 111.9
|
46.7 | 0.29 | 4.3685 | -0.9077 | 1 | 17.91 | 415.4 | 2.41 | 111.9 | 2.512 | 0.66 | 0.72 | 0 | 0 | 0.50 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 17 clashes; 2 protein clashes
|
|
| T11 T11 |
|
108 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_188
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 339.5 · logP 3.68 · TPSA 70.9
|
47.5 | 0.48 | 2.5688 | -1.0785 | 5 | 13.56 | 339.5 | 3.68 | 70.9 | 3.125 | 0.62 | 0.72 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 2 protein clashes
|
|
| T11 T11 |
|
109 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z275023258
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 29.0, geometry warning, and strain ΔE = 29.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 422.9 · logP 3.07 · TPSA 75.7
|
47.3 | 0.55 | 1.5294 | -0.8826 | 7 | 29.02 | 422.9 | 3.07 | 75.7 | 2.812 | 0.62 | 0.71 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 29.0
|
|
| T11 T11 |
|
110 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z14242918
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; high strain Δ 40.2, geometry warning, and strain ΔE = 40.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 416.4 · logP 1.61 · TPSA 126.1
|
46.5 | 0.48 | 2.1500 | -0.8925 | 2 | 40.23 | 416.4 | 1.61 | 126.1 | 3.620 | 0.66 | 0.67 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; high strain Δ 40.2
|
|
| T11 T11 |
|
111 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30000773
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 21.9, geometry warning, and strain ΔE = 21.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 429.3 · logP 3.20 · TPSA 75.7
|
48.7 | 0.49 | 2.0299 | -0.8988 | 2 | 21.89 | 429.3 | 3.20 | 75.7 | 2.000 | 0.62 | 0.58 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 21.9
|
|
| T11 T11 |
|
112 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z420888184
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein clashes; moderate strain Δ 22.8, geometry warning, and strain ΔE = 22.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 346.4 · logP 1.94 · TPSA 89.7
|
47.1 | 0.34 | 4.0732 | -1.0691 | 2 | 22.84 | 346.4 | 1.94 | 89.7 | 1.966 | 0.73 | 0.62 | 0 | 0 | 0.92 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes; moderate strain Δ 22.8
|
|
| T11 T11 |
|
113 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30857856
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 324.4 · logP 1.30 · TPSA 89.3
|
51.2 | 0.52 | 2.7180 | -1.3016 | 4 | 13.02 | 324.4 | 1.30 | 89.3 | 1.933 | 0.70 | 0.68 | 0 | 0 | 0.84 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 2 protein clashes
|
|
| T11 T11 |
|
114 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC223
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 22.3, geometry warning, and strain ΔE = 22.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 406.0 · logP 0.72 · TPSA 79.0
|
48.7 | 0.51 | 1.7746 | -0.8778 | 3 | 22.35 | 406.0 | 0.72 | 79.0 | 4.273 | 0.70 | 0.67 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 22.3
|
|
| T11 T11 |
|
115 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z16042352
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; high strain Δ 31.5, geometry warning, and strain ΔE = 31.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 322.4 · logP 2.62 · TPSA 62.4
|
48.3 | 0.48 | 3.5835 | -1.3706 | 0 | 31.52 | 322.4 | 2.62 | 62.4 | 3.448 | 0.62 | 0.68 | 0 | 0 | 0.46 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes; high strain Δ 31.5
|
|
| T11 T11 |
|
116 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56849599
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 26.2, geometry warning, and strain ΔE = 26.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 416.9 · logP 4.51 · TPSA 68.2
|
46.0 | 0.45 | 2.3559 | -0.8764 | 0 | 26.24 | 416.9 | 4.51 | 68.2 | 2.280 | 0.43 | 0.66 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 26.2
|
|
| T11 T11 |
|
117 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_52
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 329.4 · logP 3.72 · TPSA 90.7
|
45.4 | 0.39 | 3.1311 | -0.9460 | 2 | 16.71 | 329.4 | 3.72 | 90.7 | 2.031 | 0.58 | 0.55 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T11 T11 |
|
118 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z123660746
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein clashes, geometry warning, and strain ΔE = 18.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 360.4 · logP 1.69 · TPSA 95.7
|
46.6 | 0.29 | 4.3079 | -0.9709 | 1 | 18.27 | 360.4 | 1.69 | 95.7 | 1.798 | 0.73 | 0.56 | 0 | 0 | 0.87 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes
|
|
| T11 T11 |
|
119 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_89
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein clashes; high strain Δ 33.1, geometry warning, and strain ΔE = 33.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 413.9 · logP 2.92 · TPSA 82.2
|
43.7 | 0.32 | 3.9788 | -0.8860 | 0 | 33.13 | 413.9 | 2.92 | 82.2 | 2.656 | 0.55 | 0.66 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes; high strain Δ 33.1
|
|
| T11 T11 |
|
120 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK214
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 409.5 · logP 3.80 · TPSA 100.6
|
46.3 | 0.49 | 2.1698 | -0.9045 | 5 | 16.37 | 409.5 | 3.80 | 100.6 | 3.606 | 0.66 | 0.61 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 1 protein clash
|
|
| T11 T11 |
|
121 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z20253414
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 4 protein clashes, geometry warning, and strain ΔE = 18.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 371.4 · logP 2.19 · TPSA 102.1
|
43.5 | 0.33 | 3.9750 | -0.9119 | 5 | 18.32 | 371.4 | 2.19 | 102.1 | 2.161 | 0.58 | 0.68 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 4 protein clashes
|
|
| T11 T11 |
|
122 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC2_35
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 27.0, geometry warning, and strain ΔE = 27.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 452.0 · logP -0.00 · TPSA 62.4
|
45.9 | 0.40 | 2.8078 | -0.7871 | 1 | 27.02 | 452.0 | -0.00 | 62.4 | 3.797 | 0.73 | 0.51 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; moderate strain Δ 27.0
|
|
| T11 T11 |
|
123 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z27783184
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 410.5 · logP 3.58 · TPSA 66.5
|
44.5 | 0.46 | 2.2856 | -0.8284 | 7 | 16.80 | 410.5 | 3.58 | 66.5 | 2.417 | 0.62 | 0.56 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash
|
|
| T11 T11 |
|
124 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_181
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 28.8, geometry warning, and strain ΔE = 28.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 367.4 · logP 1.58 · TPSA 128.2
|
45.2 | 0.33 | 3.6384 | -0.9800 | 0 | 28.85 | 367.4 | 1.58 | 128.2 | 2.538 | 0.66 | 0.65 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 28.8
|
|
| T11 T11 |
|
125 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1213669791
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 462.9 · logP 2.71 · TPSA 124.6
|
45.2 | 0.46 | 2.3758 | -0.8011 | 5 | 18.81 | 462.9 | 2.71 | 124.6 | 2.367 | 0.52 | 0.62 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T11 T11 |
|
126 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49712358
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 277.3 · logP 3.78 · TPSA 57.5
|
43.1 | 0.30 | 4.6079 | -1.1644 | 6 | 17.03 | 277.3 | 3.78 | 57.5 | 2.113 | 0.73 | 0.63 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 3 protein clashes
|
|
| T11 T11 |
|
127 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_171
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 4 protein contact clashes; high strain Δ 40.5, geometry warning, and strain ΔE = 40.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 470.6 · logP 1.54 · TPSA 88.9
|
47.9 | 0.56 | 1.0395 | -0.7771 | 4 | 40.52 | 470.6 | 1.54 | 88.9 | 3.745 | 0.70 | 0.68 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 4 protein contact clashes; high strain Δ 40.5
|
|
| T11 T11 |
|
128 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30225126
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; high strain Δ 47.9, geometry warning, and strain ΔE = 47.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 459.6 · logP 3.18 · TPSA 86.8
|
42.7 | 0.54 | 1.4368 | -0.8503 | 2 | 47.87 | 459.6 | 3.18 | 86.8 | 2.701 | 0.44 | 0.56 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; high strain Δ 47.9
|
|
| T11 T11 |
|
129 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z13863770
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; high strain Δ 42.2, geometry warning, and strain ΔE = 42.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 387.4 · logP 2.29 · TPSA 97.0
|
45.3 | 0.50 | 1.7668 | -0.8471 | 1 | 42.18 | 387.4 | 2.29 | 97.0 | 2.857 | 0.62 | 0.47 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; high strain Δ 42.2
|
|
| T11 T11 |
|
130 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z20271426
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 401.5 · logP 4.26 · TPSA 72.2
|
40.2 | 0.47 | 2.3918 | -0.9311 | 10 | 17.33 | 401.5 | 4.26 | 72.2 | 2.551 | 0.40 | 0.71 | 0 | 0 | 0.50 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T11 T11 |
|
131 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC324
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 4 protein clashes, geometry warning, and strain ΔE = 19.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 305.4 · logP 0.95 · TPSA 76.8
|
45.8 | 0.41 | 3.8267 | -1.2864 | 2 | 19.42 | 305.4 | 0.95 | 76.8 | 2.783 | 0.70 | 0.50 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 4 protein clashes
|
|
| T11 T11 |
|
132 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45612920
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 416.5 · logP 5.35 · TPSA 59.1
|
44.6 | 0.43 | 2.5898 | -0.8757 | 0 | 17.25 | 416.5 | 5.35 | 59.1 | 2.081 | 0.32 | 0.66 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T11 T11 |
|
133 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1097085036
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 3 protein clashes, geometry warning, and strain ΔE = 18.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 265.3 · logP 2.78 · TPSA 58.0
|
49.0 | 0.39 | 3.8168 | -1.2449 | 1 | 18.48 | 265.3 | 2.78 | 58.0 | 2.362 | 0.73 | 0.66 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 3 protein clashes
|
|
| T11 T11 |
|
134 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57009636
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 21.3, geometry warning, and strain ΔE = 21.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 315.3 · logP 1.60 · TPSA 88.0
|
49.1 | 0.50 | 2.0787 | -1.0390 | 3 | 21.28 | 315.3 | 1.60 | 88.0 | 2.587 | 0.73 | 0.58 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 21.3
|
|
| T11 T11 |
|
135 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56833821
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 27.6, geometry warning, and strain ΔE = 27.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 355.5 · logP 2.55 · TPSA 106.5
|
47.0 | 0.51 | 2.0915 | -0.9681 | 4 | 27.62 | 355.5 | 2.55 | 106.5 | 3.412 | 0.62 | 0.70 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 27.6
|
|
| T11 T11 |
|
136 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44305068
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 400.8 · logP 3.74 · TPSA 102.4
|
47.1 | 0.46 | 2.7917 | -1.0879 | 2 | 14.31 | 400.8 | 3.74 | 102.4 | 2.336 | 0.58 | 0.58 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash
|
|
| T11 T11 |
|
137 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1434525715
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein clashes; moderate strain Δ 21.4, geometry warning, and strain ΔE = 21.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 381.5 · logP 3.12 · TPSA 88.2
|
47.7 | 0.42 | 2.8570 | -0.9124 | 2 | 21.40 | 381.5 | 3.12 | 88.2 | 1.831 | 0.58 | 0.66 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes; moderate strain Δ 21.4
|
|
| T11 T11 |
|
138 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z166606608
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash; high strain Δ 31.0, geometry warning, and strain ΔE = 31.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 352.3 · logP 2.14 · TPSA 84.6
|
45.8 | 0.43 | 2.7009 | -0.9624 | 1 | 30.99 | 352.3 | 2.14 | 84.6 | 3.259 | 0.58 | 0.69 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash; high strain Δ 31.0
|
|
| T11 T11 |
|
139 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30562883
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash; high strain Δ 31.1, geometry warning, and strain ΔE = 31.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 352.8 · logP 2.77 · TPSA 66.5
|
48.8 | 0.53 | 1.7647 | -1.0515 | 3 | 31.05 | 352.8 | 2.77 | 66.5 | 1.815 | 0.65 | 0.64 | 0 | 0 | 0.90 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash; high strain Δ 31.1
|
|
| T11 T11 |
|
140 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z92413403
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 22.9, geometry warning, and strain ΔE = 22.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 430.5 · logP 2.05 · TPSA 132.9
|
46.9 | 0.49 | 2.1977 | -0.9292 | 2 | 22.93 | 430.5 | 2.05 | 132.9 | 2.305 | 0.52 | 0.61 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 22.9
|
|
| T11 T11 |
|
141 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0430
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; high strain Δ 32.7, geometry warning, and strain ΔE = 32.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 318.4 · logP 2.34 · TPSA 95.8
|
47.5 | 0.45 | 3.2797 | -1.1262 | 3 | 32.66 | 318.4 | 2.34 | 95.8 | 1.984 | 0.62 | 0.62 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; high strain Δ 32.7
|
|
| T11 T11 |
|
142 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z27739534
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 1 protein clash; high strain Δ 31.9, geometry warning, and strain ΔE = 31.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 398.4 · logP 2.49 · TPSA 104.3
|
46.2 | 0.39 | 3.0794 | -0.9091 | 1 | 31.89 | 398.4 | 2.49 | 104.3 | 2.723 | 0.58 | 0.76 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 1 protein clash; high strain Δ 31.9
|
|
| T11 T11 |
|
143 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC2_8
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash; high strain Δ 49.1, geometry warning, and strain ΔE = 49.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 354.4 · logP 3.50 · TPSA 56.1
|
44.9 | 0.44 | 2.6885 | -0.8972 | 0 | 49.10 | 354.4 | 3.50 | 56.1 | 3.511 | 0.62 | 0.60 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash; high strain Δ 49.1
|
|
| T11 T11 |
|
144 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2405
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes, geometry warning, and strain ΔE = 18.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 365.4 · logP 2.02 · TPSA 87.3
|
45.2 | 0.42 | 2.7587 | -0.8822 | 5 | 18.17 | 365.4 | 2.02 | 87.3 | 2.772 | 0.58 | 0.72 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T11 T11 |
|
145 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0432
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 4 protein contact clashes; moderate strain Δ 27.3, geometry warning, and strain ΔE = 27.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 398.4 · logP 3.33 · TPSA 110.3
|
46.3 | 0.53 | 1.4370 | -0.8572 | 6 | 27.35 | 398.4 | 3.33 | 110.3 | 2.030 | 0.58 | 0.65 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 4 protein contact clashes; moderate strain Δ 27.3
|
|
| T11 T11 |
|
146 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC552
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 367.4 · logP 1.06 · TPSA 123.1
|
43.5 | 0.36 | 3.1278 | -0.8761 | 7 | 14.98 | 367.4 | 1.06 | 123.1 | 3.450 | 0.66 | 0.78 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T11 T11 |
|
147 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z124328460
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes; high strain Δ 34.0, geometry warning, and strain ΔE = 34.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 331.4 · logP 2.47 · TPSA 101.3
|
46.2 | 0.41 | 3.1735 | -1.1251 | 1 | 34.03 | 331.4 | 2.47 | 101.3 | 1.884 | 0.62 | 0.68 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes; high strain Δ 34.0
|
|
| T11 T11 |
|
148 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56811592
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 1 protein clash; moderate strain Δ 20.6, geometry warning, and strain ΔE = 20.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 375.5 · logP 2.47 · TPSA 92.4
|
42.9 | 0.49 | 2.1279 | -0.9766 | 6 | 20.63 | 375.5 | 2.47 | 92.4 | 2.554 | 0.62 | 0.37 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 1 protein clash; moderate strain Δ 20.6
|
|
| T11 T11 |
|
149 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
GemmaOHDUnisi_18
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes; high strain Δ 58.2, geometry warning, and strain ΔE = 58.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 390.5 · logP 3.96 · TPSA 98.5
|
45.2 | 0.46 | 2.5893 | -0.9273 | 0 | 58.18 | 390.5 | 3.96 | 98.5 | 2.459 | 0.58 | 0.62 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; high strain Δ 58.2
|
|
| T11 T11 |
|
150 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57008911
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 314.3 · logP 1.19 · TPSA 98.7
|
46.3 | 0.42 | 2.9429 | -1.0786 | 4 | 17.27 | 314.3 | 1.19 | 98.7 | 1.806 | 0.66 | 0.60 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T11 T11 |
|
151 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_188
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 422.5 · logP 4.60 · TPSA 71.3
|
43.0 | 0.43 | 2.1746 | -0.7746 | 3 | 17.72 | 422.5 | 4.60 | 71.3 | 2.798 | 0.40 | 0.67 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T11 T11 |
|
152 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z14183817
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes, geometry warning, and strain ΔE = 19.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 383.8 · logP 3.18 · TPSA 82.0
|
42.7 | 0.29 | 4.1765 | -0.8786 | 3 | 19.75 | 383.8 | 3.18 | 82.0 | 3.568 | 0.62 | 0.71 | 0 | 0 | 0.85 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein clashes
|
|
| T11 T11 |
|
153 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1159
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 26.4, geometry warning, and strain ΔE = 26.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 278.4 · logP 2.70 · TPSA 69.9
|
42.3 | 0.53 | 2.1444 | -1.1738 | 8 | 26.36 | 278.4 | 2.70 | 69.9 | 2.623 | 0.67 | 0.58 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 26.4
|
|
| T11 T11 |
|
154 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30004883
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 18 clashes; 1 protein clash; moderate strain Δ 25.0, geometry warning, and strain ΔE = 25.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 433.5 · logP 4.30 · TPSA 97.4
|
42.9 | 0.37 | 3.0506 | -0.7759 | 1 | 25.04 | 433.5 | 4.30 | 97.4 | 1.988 | 0.36 | 0.70 | 0 | 0 | 0.47 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 18 clashes; 1 protein clash; moderate strain Δ 25.0
|
|
| T11 T11 |
|
155 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC288
36% of hydrophobic surface appears solvent-exposed (8/22 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 12 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 394.5 · logP 3.58 · TPSA 92.4
|
41.8 | 0.51 | 1.9421 | -0.9423 | 8 | 19.40 | 394.5 | 3.58 | 92.4 | 3.677 | 0.58 | 0.55 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T11 T11 |
|
156 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC369
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 9 protein contact clashes; high strain Δ 31.6, geometry warning, and strain ΔE = 31.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 427.5 · logP 3.96 · TPSA 100.6
|
43.6 | 0.51 | 1.9077 | -0.9512 | 6 | 31.63 | 427.5 | 3.96 | 100.6 | 3.829 | 0.66 | 0.60 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 9 protein contact clashes; high strain Δ 31.6
|
|
| T11 T11 |
|
157 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK218
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein clashes, geometry warning, and strain ΔE = 19.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 423.5 · logP 3.89 · TPSA 100.6
|
41.7 | 0.30 | 3.7498 | -0.7983 | 5 | 19.63 | 423.5 | 3.89 | 100.6 | 3.477 | 0.66 | 0.68 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes
|
|
| T11 T11 |
|
158 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57514561
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 11 clashes; 3 protein contact clashes; moderate strain Δ 28.8, geometry warning, and strain ΔE = 28.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 455.6 · logP 4.12 · TPSA 88.1
|
36.4 | 0.55 | 1.0653 | -0.7861 | 11 | 28.78 | 455.6 | 4.12 | 88.1 | 2.812 | 0.25 | 0.67 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 3 protein contact clashes; moderate strain Δ 28.8
|
|
| T11 T11 |
|
159 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56174643
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 17 clashes; 2 protein clashes, geometry warning, and strain ΔE = 18.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 345.4 · logP 4.68 · TPSA 58.0
|
39.2 | 0.32 | 3.9986 | -0.9668 | 9 | 18.34 | 345.4 | 4.68 | 58.0 | 2.655 | 0.62 | 0.64 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 17 clashes; 2 protein clashes
|
|
| T11 T11 |
|
160 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_210
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 22.8, geometry warning, and strain ΔE = 22.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 393.5 · logP 1.59 · TPSA 59.8
|
45.2 | 0.36 | 3.4391 | -0.9305 | 3 | 22.83 | 393.5 | 1.59 | 59.8 | 3.373 | 0.73 | 0.64 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 22.8
|
|
| T11 T11 |
|
161 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49995281
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes; high strain Δ 30.6, geometry warning, and strain ΔE = 30.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 364.4 · logP 1.39 · TPSA 118.4
|
45.3 | 0.40 | 3.1512 | -0.9511 | 3 | 30.59 | 364.4 | 1.39 | 118.4 | 3.129 | 0.70 | 0.62 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; high strain Δ 30.6
|
|
| T11 T11 |
|
162 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1455904573
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 21.7, geometry warning, and strain ΔE = 21.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 269.3 · logP 2.48 · TPSA 84.2
|
47.1 | 0.46 | 2.8464 | -1.1859 | 3 | 21.70 | 269.3 | 2.48 | 84.2 | 1.546 | 0.67 | 0.70 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 21.7
|
|
| T11 T11 |
|
163 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57906434
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 372.4 · logP 2.94 · TPSA 102.4
|
45.9 | 0.39 | 3.0238 | -0.9723 | 2 | 12.25 | 372.4 | 2.94 | 102.4 | 2.206 | 0.58 | 0.61 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T11 T11 |
|
164 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z27619347
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 26.7, geometry warning, and strain ΔE = 26.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 527.7 · logP 2.37 · TPSA 113.1
|
46.3 | 0.46 | 2.2332 | -0.7715 | 2 | 26.74 | 527.7 | 2.37 | 113.1 | 2.875 | 0.55 | 0.63 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 26.7
|
|
| T11 T11 |
|
165 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z31779235
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 1 protein clash; moderate strain Δ 21.9, geometry warning, and strain ΔE = 21.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 390.4 · logP 3.74 · TPSA 76.7
|
45.5 | 0.40 | 2.7777 | -0.8306 | 3 | 21.92 | 390.4 | 3.74 | 76.7 | 1.784 | 0.58 | 0.61 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 1 protein clash; moderate strain Δ 21.9
|
|
| T11 T11 |
|
166 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK47
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 24.7, geometry warning, and strain ΔE = 24.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 366.5 · logP 3.19 · TPSA 84.1
|
46.7 | 0.48 | 2.5415 | -1.0919 | 4 | 24.71 | 366.5 | 3.19 | 84.1 | 3.324 | 0.70 | 0.64 | 0 | 0 | 0.42 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 24.7
|
|
| T11 T11 |
|
167 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0768
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; high strain Δ 41.3, geometry warning, and strain ΔE = 41.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 381.4 · logP -1.06 · TPSA 170.1
|
45.6 | 0.41 | 3.4430 | -1.0510 | 2 | 41.32 | 381.4 | -1.06 | 170.1 | 2.437 | 0.56 | 0.78 | 0 | 0 | 0.42 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; high strain Δ 41.3
|
|
| T11 T11 |
|
168 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56778174
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; high strain Δ 52.7, geometry warning, and strain ΔE = 52.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 342.4 · logP 3.04 · TPSA 91.2
|
43.5 | 0.37 | 3.7600 | -1.0909 | 1 | 52.66 | 342.4 | 3.04 | 91.2 | 2.718 | 0.62 | 0.71 | 0 | 0 | 0.34 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; high strain Δ 52.7
|
|
| T11 T11 |
|
169 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z55286499
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 3 protein clashes; high strain Δ 34.0, geometry warning, and strain ΔE = 34.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 321.4 · logP 1.99 · TPSA 110.5
|
46.5 | 0.34 | 4.1385 | -1.2091 | 1 | 33.95 | 321.4 | 1.99 | 110.5 | 1.663 | 0.73 | 0.69 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 3 protein clashes; high strain Δ 34.0
|
|
| T11 T11 |
|
170 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57728363
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein clashes; high strain Δ 51.5, geometry warning, and strain ΔE = 51.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 355.4 · logP 1.86 · TPSA 106.1
|
42.6 | 0.34 | 3.6303 | -0.9472 | 1 | 51.54 | 355.4 | 1.86 | 106.1 | 3.981 | 0.70 | 0.70 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes; high strain Δ 51.5
|
|
| T11 T11 |
|
171 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0819
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein clashes; moderate strain Δ 25.7, geometry warning, and strain ΔE = 25.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 352.4 · logP -0.16 · TPSA 119.3
|
45.3 | 0.39 | 3.1304 | -0.9930 | 7 | 25.74 | 352.4 | -0.16 | 119.3 | 2.218 | 0.73 | 0.74 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes; moderate strain Δ 25.7
|
|
| T11 T11 |
|
172 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z167204554
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 27.6, geometry warning, and strain ΔE = 27.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 371.5 · logP 1.05 · TPSA 61.2
|
43.8 | 0.45 | 2.0915 | -0.8886 | 4 | 27.58 | 371.5 | 1.05 | 61.2 | 3.065 | 0.73 | 0.42 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 27.6
|
|
| T11 T11 |
|
173 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56850314
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 25.7, geometry warning, and strain ΔE = 25.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 349.4 · logP 4.30 · TPSA 78.3
|
44.6 | 0.34 | 3.7774 | -0.9807 | 1 | 25.72 | 349.4 | 4.30 | 78.3 | 2.944 | 0.58 | 0.69 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 25.7
|
|
| T11 T11 |
|
174 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45614063
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 21.8, geometry warning, and strain ΔE = 21.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 368.5 · logP 2.43 · TPSA 106.3
|
47.0 | 0.44 | 3.1427 | -1.1339 | 3 | 21.76 | 368.5 | 2.43 | 106.3 | 1.876 | 0.62 | 0.62 | 0 | 0 | 0.86 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 21.8
|
|
| T11 T11 |
|
175 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30270284
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 334.4 · logP 3.89 · TPSA 59.0
|
45.0 | 0.48 | 2.3032 | -1.0613 | 6 | 15.69 | 334.4 | 3.89 | 59.0 | 2.972 | 0.62 | 0.67 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T11 T11 |
|
176 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_205
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 3 protein clashes; moderate strain Δ 22.8, geometry warning, and strain ΔE = 22.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 356.8 · logP 3.92 · TPSA 67.8
|
42.5 | 0.33 | 4.3659 | -1.1036 | 6 | 22.82 | 356.8 | 3.92 | 67.8 | 2.061 | 0.62 | 0.68 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 3 protein clashes; moderate strain Δ 22.8
|
|
| T11 T11 |
|
177 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_8
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 3 protein clashes; moderate strain Δ 27.5, geometry warning, and strain ΔE = 27.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 469.6 · logP 1.01 · TPSA 72.0
|
39.7 | 0.23 | 4.6631 | -0.8062 | 2 | 27.49 | 469.6 | 1.01 | 72.0 | 4.839 | 0.66 | 0.66 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 3 protein clashes; moderate strain Δ 27.5
|
|
| T11 T11 |
|
178 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_113
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; high strain Δ 43.0, geometry warning, and strain ΔE = 43.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 407.3 · logP 2.19 · TPSA 126.0
|
40.1 | 0.38 | 3.1400 | -1.0266 | 1 | 43.02 | 407.3 | 2.19 | 126.0 | 2.646 | 0.55 | 0.53 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; high strain Δ 43.0
|
|
| T11 T11 |
|
179 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19085615
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 1 protein clash; very favorable intra outlier; high strain Δ 46.2, geometry warning, and strain ΔE = 46.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 480.6 · logP 4.51 · TPSA 93.8
|
40.5 | 0.47 | 2.9065 | -0.7852 | 5 | 46.22 | 480.6 | 4.51 | 93.8 | 2.852 | 0.25 | 0.78 | 0 | 0 | 0.38 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 1 protein clash; very favorable intra outlier; high strain Δ 46.2
|
|
| T11 T11 |
|
180 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1163
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 24.8, geometry warning, and strain ΔE = 24.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 293.4 · logP 3.12 · TPSA 53.1
|
46.1 | 0.44 | 2.8908 | -1.0918 | 4 | 24.77 | 293.4 | 3.12 | 53.1 | 2.493 | 0.73 | 0.56 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 24.8
|
|
| T11 T11 |
|
181 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0475
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; high strain Δ 39.2, geometry warning, and strain ΔE = 39.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 385.4 · logP 0.43 · TPSA 155.7
|
42.4 | 0.40 | 3.1356 | -0.9722 | 1 | 39.24 | 385.4 | 0.43 | 155.7 | 2.013 | 0.50 | 0.68 | 0 | 0 | 0.50 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 9 clashes; 2 protein clashes; high strain Δ 39.2
|
|
| T11 T11 |
|
182 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z25403655
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 24.5, geometry warning, and strain ΔE = 24.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 432.5 · logP 2.66 · TPSA 116.3
|
40.9 | 0.40 | 2.9238 | -0.8182 | 9 | 24.48 | 432.5 | 2.66 | 116.3 | 2.984 | 0.55 | 0.74 | 0 | 0 | 0.47 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 24.5
|
|
| T11 T11 |
|
183 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z27604073
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein clashes; high strain Δ 51.3, geometry warning, and strain ΔE = 51.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 365.4 · logP 3.91 · TPSA 98.9
|
40.8 | 0.22 | 4.7689 | -0.8931 | 0 | 51.32 | 365.4 | 3.91 | 98.9 | 2.206 | 0.58 | 0.77 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes; high strain Δ 51.3
|
|
| T11 T11 |
|
184 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_3783
Hydrophobic burial looks adequate: 32% exposed (8/25 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 21.3, geometry warning, and strain ΔE = 21.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 415.5 · logP 2.55 · TPSA 70.8
|
40.0 | 0.40 | 2.6350 | -0.7715 | 8 | 21.26 | 415.5 | 2.55 | 70.8 | 3.897 | 0.62 | 0.61 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 21.3
|
|
| T11 T11 |
|
185 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1134
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 25.7, geometry warning, and strain ΔE = 25.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 341.4 · logP 3.57 · TPSA 69.6
|
42.6 | 0.32 | 3.5608 | -0.9115 | 1 | 25.66 | 341.4 | 3.57 | 69.6 | 2.730 | 0.62 | 0.54 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 25.7
|
|
| T11 T11 |
|
186 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC57
Hydrophobic burial looks adequate: 23% exposed (7/31 atoms). No penalty flagged.
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 2 clashes; 1 protein clash; high strain Δ 64.0 and strain ΔE = 64.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 538.8 · logP 9.02 · TPSA 55.8
|
35.2 | 0.49 | 1.4110 | -0.6610 | 7 | 63.96 | 538.8 | 9.02 | 55.8 | 5.486 | 0.07 | 0.60 | 0 | 0 | 0.14 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 2 clashes; 1 protein clash; high strain Δ 64.0
|
|
| T11 T11 |
|
187 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56789391
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes, geometry warning, and strain ΔE = 18.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 328.3 · logP 2.78 · TPSA 102.2
|
45.8 | 0.40 | 3.4477 | -1.1162 | 2 | 18.41 | 328.3 | 2.78 | 102.2 | 2.464 | 0.55 | 0.70 | 0 | 0 | 0.44 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T11 T11 |
|
188 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49597668
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 28.6, geometry warning, and strain ΔE = 28.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 414.9 · logP 3.30 · TPSA 100.5
|
46.6 | 0.45 | 2.1277 | -0.8663 | 2 | 28.63 | 414.9 | 3.30 | 100.5 | 2.087 | 0.55 | 0.69 | 0 | 0 | 0.48 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 28.6
|
|
| T11 T11 |
|
189 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56821783
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes; high strain Δ 32.5, geometry warning, and strain ΔE = 32.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 332.4 · logP 0.14 · TPSA 77.4
|
44.5 | 0.36 | 3.5201 | -1.0492 | 3 | 32.49 | 332.4 | 0.14 | 77.4 | 2.938 | 0.70 | 0.70 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes; high strain Δ 32.5
|
|
| T11 T11 |
|
190 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z95717428
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein clashes; moderate strain Δ 27.2, geometry warning, and strain ΔE = 27.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 347.4 · logP 3.46 · TPSA 63.1
|
43.7 | 0.39 | 3.0420 | -0.9180 | 5 | 27.15 | 347.4 | 3.46 | 63.1 | 1.995 | 0.62 | 0.64 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes; moderate strain Δ 27.2
|
|
| T11 T11 |
|
191 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z71577027
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 3 protein clashes; moderate strain Δ 29.9, geometry warning, and strain ΔE = 29.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 369.4 · logP 2.84 · TPSA 108.4
|
44.3 | 0.27 | 4.4795 | -0.9335 | 1 | 29.85 | 369.4 | 2.84 | 108.4 | 1.882 | 0.58 | 0.78 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 3 protein clashes; moderate strain Δ 29.9
|
|
| T11 T11 |
|
192 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56976985
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 20.8, geometry warning, and strain ΔE = 20.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 328.8 · logP 3.40 · TPSA 83.3
|
43.2 | 0.33 | 3.9034 | -1.0402 | 2 | 20.81 | 328.8 | 3.40 | 83.3 | 2.362 | 0.58 | 0.62 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 20.8
|
|
| T11 T11 |
|
193 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2752015126
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 13 clashes; 2 protein clashes; moderate strain Δ 29.2, geometry warning, and strain ΔE = 29.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 399.4 · logP 3.60 · TPSA 103.8
|
40.7 | 0.31 | 3.5986 | -0.8600 | 1 | 29.18 | 399.4 | 3.60 | 103.8 | 4.317 | 0.58 | 0.68 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes; moderate strain Δ 29.2
|
|
| T11 T11 |
|
194 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z55260483
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash; high strain Δ 32.6, geometry warning, and strain ΔE = 32.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 400.5 · logP 1.15 · TPSA 123.4
|
42.2 | 0.44 | 2.7808 | -0.9603 | 4 | 32.56 | 400.5 | 1.15 | 123.4 | 4.009 | 0.63 | 0.53 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; high strain Δ 32.6
|
|
| T11 T11 |
|
195 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z71526968
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash; high strain Δ 41.1, geometry warning, and strain ΔE = 41.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 428.5 · logP 1.91 · TPSA 118.5
|
42.7 | 0.41 | 2.4327 | -0.8044 | 3 | 41.07 | 428.5 | 1.91 | 118.5 | 2.146 | 0.60 | 0.73 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 8 clashes; 1 protein clash; high strain Δ 41.1
|
|
| T11 T11 |
|
196 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z32421752
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; high strain Δ 33.3, geometry warning, and strain ΔE = 33.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 403.9 · logP 0.56 · TPSA 149.4
|
41.9 | 0.32 | 4.2457 | -1.0618 | 2 | 33.32 | 403.9 | 0.56 | 149.4 | 1.963 | 0.60 | 0.56 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; high strain Δ 33.3
|
|
| T11 T11 |
|
197 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z87656593
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 10 clashes; 1 protein clash; high strain Δ 47.4, geometry warning, and strain ΔE = 47.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 421.5 · logP 2.13 · TPSA 109.6
|
38.8 | 0.47 | 2.1761 | -0.8797 | 8 | 47.45 | 421.5 | 2.13 | 109.6 | 2.563 | 0.58 | 0.52 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; high strain Δ 47.4
|
|
| T11 T11 |
|
198 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57695216
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 2 protein clashes; high strain Δ 37.7, geometry warning, and strain ΔE = 37.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 367.4 · logP 3.53 · TPSA 91.6
|
40.0 | 0.29 | 4.2594 | -0.9146 | 2 | 37.70 | 367.4 | 3.53 | 91.6 | 2.756 | 0.62 | 0.51 | 0 | 0 | 0.81 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 2 protein clashes; high strain Δ 37.7
|
|
| T11 T11 |
|
199 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_115
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 2 protein clashes; high strain Δ 35.0, geometry warning, and strain ΔE = 35.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 483.4 · logP 2.35 · TPSA 139.1
|
41.9 | 0.33 | 3.4268 | -0.8476 | 1 | 35.00 | 483.4 | 2.35 | 139.1 | 2.547 | 0.52 | 0.69 | 0 | 0 | 0.47 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes; high strain Δ 35.0
|
|
| T11 T11 |
|
200 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56174682
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 24.9, geometry warning, and strain ΔE = 24.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 334.4 · logP 3.99 · TPSA 70.9
|
44.4 | 0.40 | 3.0828 | -1.0164 | 4 | 24.86 | 334.4 | 3.99 | 70.9 | 2.952 | 0.62 | 0.70 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 24.9
|
Score composition ▼ show
Docking 28% · final rank, interaction-normalized score, raw docking score
Burial 18% · absolute exposed hydrophobic atom count (lower is better)
Strain 14% · strain delta, intra score, geometry sanity
Safety / ADMET 18% · ADMET score with hERG/AMES/DILI/bioaccumulation penalties — Pareto objective
Ecotoxicology 9% · fish/daphnia/algae LC50 classes + bioaccumulation + persistence — Pareto objective
Synthesis 10% · SA score when available, otherwise Fsp3 proxy
Native similarity 12% · contact and H-bond recall when a native reference exists
Diversity shortlist 0% · cached shortlist already includes the novelty-aware selection step
How ranking works: Pareto fronts are built from six default objectives — docking score, ligand efficiency, burial depth, strain energy, ADMET safety, and ecotoxicology (fish/daphnia/algae LC₅₀ + bioaccumulation + persistence). Front 1 contains non-dominated ligands: no other ligand beats them across all six objectives simultaneously. Inside each front, ligands are ordered by a compromise score with explicit penalties for PAINS, reactivity, toxicity alerts, geometry warnings, excluded poses, and artifact annotations. The top 200 are returned using a diversity-aware selection step.
Methodology ▼ show
1. Candidate definition. For each target we keep one best pose per ligand, so the shortlist is not inflated by many similar poses of the same compound.
2. Objective set. Each ligand is evaluated across docking quality, absolute nonpolar solvent exposure (`n_exposed`), conformational strain, native-like interaction similarity when a native reference exists, safety and ecotoxicology, synthesizability, and general developability indicators such as QED.
2a. SASA / burial source. `SASA: done` = cached FreeSASA metrics. `queued/running` = background worker scheduled. `failed` = worker failed. `missing` = no SASA cached yet.
3. Liability penalties. PAINS motifs, reactive groups, toxicity alerts, artifact annotations, geometry warnings, and excluded-pose flags reduce the compromise score and are shown explicitly.
4. Pareto ranking. Front 1 = non-dominated ligands (no other ligand is better in all objectives simultaneously). Lower front number = more balanced profile.
5. Missing SASA handling. Missing SASA lowers `Data completeness` to `Provisional` but does not automatically reject a ligand. Binding and geometry axes stay independent.
6. Compromise score. `100 × clamp(weighted positive − liability penalty − missing-data penalty)`. Weights: docking 28%, burial 18%, strain 14%, safety/ecotox 18%, synthesis 10%, native similarity 12% (when reference exists).
7. Component details. Docking = `final_rank_score` 55% + `score_inter_norm` 30% + raw `score` 15%. Strain = `strain_delta` 55% + `score_intra_norm` 30% + geometry sanity 15%.
8. Final shortlist. Top 50 per target taken front-by-front with diversity-aware selection — near-duplicate analogs do not dominate.
How to read the table. `Pareto` = non-dominated layer, `Compromise` = within-front ordering score, `n_exposed` = burial proxy (lower is better), `Strain dE` = conformational stress, colored dots = quick green/orange/red cue.
How to use selections. Mark compounds row-by-row, save to `Current`/`Temp`/`A/B/C` sets, export to SDF/XLSX/CSV, or send to downstream analysis pages.