L. infantum R5P · T10
L. infantum
Protein: Ribose-5-phosphate isomerase B
Targets
1
each capped at 50 ligands
Best-pose candidates
582
one best pose per ligand per target
Synth metric
SA score
direct SA metric
Absolute burial proxy
n_exposed
absolute exposed hydrophobic atoms, not fraction
Pareto front 1
12
non-dominated ligands across all selected targets
Burial source
FreeSASA 200
Proxy 0 · Missing 0
Metrics coverage
Done 200
Pending 0 · Failed 0 · Missing 0
Diversity shortlist
Novelty 0.45
High novelty 200 · Close analogs 0
New vs legacy top 50
Added 3 · Dropped 3
Stayed 197 of 200 legacy picks
T10
Native
Front 1: 12
200 / 582 shortlisted
Best: Z2939836159 · score 72.5
Pareto layers observed: 14
Metrics: done 200 · pending 0 · failed 0 · missing 0
Diversity: novelty 0.45 · close analogs 0
New vs legacy: added 3 · dropped 3 · stayed 197/200
Added: ulfkktlib_626, Z25217831, OHD_Leishmania_143
·
Dropped: KB_Leish_55, MK219, OSA_Lib_77
| Target | 2D | Rank | Pareto | Assessment | Ligand | Compromise | Docking | Final rank | Inter norm | n_exposed | Strain dE | MW | cLogP | TPSA | SA score | Safety | Native sim | PAINS | Reactive | QED | SASA | Flags | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| T10 T10 |
|
1 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2939836159
strong docking, well-buried hydrophobics, native-like contacts
DetailsWhy selected: Strong docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: 2 protein clashes.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 171.2 · logP -1.46 · TPSA 117.8
|
72.5 | 0.89 | 1.3869 | -2.3660 | 3 | 11.79 | 171.2 | -1.46 | 117.8 | 3.400 | 0.73 | 0.86 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
2 protein clashes
|
|
| T10 T10 |
|
2 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56347099
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 2 clashes; 1 protein clash and strain ΔE = 18.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 288.4 · logP 2.87 · TPSA 68.1
|
64.9 | 0.61 | 2.0181 | -1.4077 | 2 | 18.65 | 288.4 | 2.87 | 68.1 | 2.775 | 0.76 | 0.79 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 2 clashes; 1 protein clash
|
|
| T10 T10 |
|
3 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1198149433
strong docking, well-buried hydrophobics, native-like contacts
DetailsWhy selected: Strong docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 176.2 · logP 1.37 · TPSA 62.0
|
64.8 | 0.80 | 1.0488 | -1.9466 | 0 | 7.52 | 176.2 | 1.37 | 62.0 | 2.167 | 0.76 | 0.83 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 1 protein clash
|
|
| T10 T10 |
|
4 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1612297151
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 206.7 · logP 0.96 · TPSA 72.2
|
62.6 | 0.71 | 2.2728 | -1.9934 | 0 | 14.13 | 206.7 | 0.96 | 72.2 | 1.763 | 0.76 | 0.73 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 2 protein clashes
|
|
| T10 T10 |
|
5 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56802793
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 294.4 · logP 3.38 · TPSA 46.5
|
61.6 | 0.74 | 0.9142 | -1.4195 | 1 | 14.47 | 294.4 | 3.38 | 46.5 | 2.495 | 0.73 | 0.80 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 1 protein clash
|
|
| T10 T10 |
|
6 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z594284196
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 1 clash; 2 protein clashes.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 244.2 · logP -3.01 · TPSA 143.7
|
58.5 | 0.54 | 2.6562 | -1.4175 | 1 | 16.24 | 244.2 | -3.01 | 143.7 | 3.869 | 0.60 | 0.70 | 0 | 0 | 0.44 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 1 clash; 2 protein clashes
|
|
| T10 T10 |
|
7 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49539320
native-like contacts, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 242.3 · logP 2.25 · TPSA 70.4
|
55.5 | 0.67 | 1.6272 | -1.4147 | 7 | 9.15 | 242.3 | 2.25 | 70.4 | 2.227 | 0.76 | 0.71 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash
|
|
| T10 T10 |
|
8 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z21485324
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 294.3 · logP 3.30 · TPSA 75.6
|
53.9 | 0.36 | 4.4806 | -1.2851 | 0 | 4.73 | 294.3 | 3.30 | 75.6 | 2.240 | 0.70 | 0.88 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
|
|
| T10 T10 |
|
9 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z14006601
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 316.4 · logP 4.18 · TPSA 48.2
|
54.3 | 0.47 | 3.0024 | -1.0938 | 1 | 9.66 | 316.4 | 4.18 | 48.2 | 1.923 | 0.73 | 0.69 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T10 T10 |
|
10 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56845221
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 308.5 · logP 3.86 · TPSA 46.5
|
57.1 | 0.71 | 1.2062 | -1.3595 | 2 | 15.02 | 308.5 | 3.86 | 46.5 | 2.450 | 0.62 | 0.69 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 1 protein clash
|
|
| T10 T10 |
|
11 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z18451981
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: 4 protein clashes.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 364.5 · logP 3.62 · TPSA 73.8
|
47.9 | 0.36 | 3.9074 | -1.0429 | 13 | 11.13 | 364.5 | 3.62 | 73.8 | 2.527 | 0.62 | 0.77 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
4 protein clashes
|
|
| T10 T10 |
|
12 | 1 Front 1 (non-dominated) |
Binding
Medium
Geometry
Suspicious
Data
Complete
Action
Inspect
|
6FXW
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: Native reference ligand.
Action: Inspect the pose manually, especially around clashes, hydrogen bonds, and pocket fit.
MW 258.1 · logP -2.39 · TPSA 164.1
|
40.4 | 0.00 | - | - | 4 | - | 258.1 | -2.39 | 164.1 | 4.789 | 0.32 | 1.00 | 0 | 0 | 0.29 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Native reference ligand
|
|
| T10 T10 |
|
13 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57201291
strong docking, well-buried hydrophobics, native-like contacts
DetailsWhy selected: Strong docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 1 clash; 2 protein clashes.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 176.1 · logP -1.41 · TPSA 107.2
|
68.2 | 0.86 | 0.9616 | -2.1098 | 5 | 14.98 | 176.1 | -1.41 | 107.2 | 3.678 | 0.70 | 0.84 | 0 | 0 | 0.39 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 1 clash; 2 protein clashes
|
|
| T10 T10 |
|
14 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1295
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 1 clash; 1 protein clash.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 241.3 · logP 1.19 · TPSA 76.4
|
64.8 | 0.72 | 0.8122 | -1.4231 | 7 | 11.51 | 241.3 | 1.19 | 76.4 | 2.575 | 0.73 | 0.86 | 0 | 0 | 0.83 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 1 clash; 1 protein clash
|
|
| T10 T10 |
|
15 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0523
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 2 protein clashes, geometry warning, and strain ΔE = 19.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 201.2 · logP 0.03 · TPSA 97.5
|
61.4 | 0.69 | 2.2303 | -1.8646 | 0 | 19.56 | 201.2 | 0.03 | 97.5 | 1.531 | 0.73 | 0.78 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 2 protein clashes
|
|
| T10 T10 |
|
16 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1069312128
strong docking, well-buried hydrophobics, native-like contacts
DetailsWhy selected: Strong docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 190.2 · logP 1.03 · TPSA 62.0
|
61.1 | 0.76 | 1.3272 | -1.8156 | 1 | 19.17 | 190.2 | 1.03 | 62.0 | 2.479 | 0.76 | 0.79 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 1 protein clash
|
|
| T10 T10 |
|
17 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z223042524
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 212.2 · logP 0.62 · TPSA 86.2
|
59.0 | 0.61 | 2.8254 | -1.7981 | 0 | 14.72 | 212.2 | 0.62 | 86.2 | 2.368 | 0.73 | 0.80 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 3 protein clashes
|
|
| T10 T10 |
|
18 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2939811157
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 3 protein clashes; moderate strain Δ 24.6, geometry warning, and strain ΔE = 24.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 213.6 · logP 1.80 · TPSA 69.9
|
57.0 | 0.54 | 3.4329 | -1.6999 | 1 | 24.59 | 213.6 | 1.80 | 69.9 | 2.249 | 0.76 | 0.82 | 0 | 0 | 0.46 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 3 protein clashes; moderate strain Δ 24.6
|
|
| T10 T10 |
|
19 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC2_29
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 254.3 · logP 2.72 · TPSA 63.8
|
55.8 | 0.64 | 1.8754 | -1.3810 | 0 | 15.86 | 254.3 | 2.72 | 63.8 | 1.866 | 0.67 | 0.68 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T10 T10 |
|
20 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1037335854
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 281.1 · logP 2.43 · TPSA 59.3
|
55.7 | 0.62 | 2.3140 | -1.5637 | 1 | 17.10 | 281.1 | 2.43 | 59.3 | 3.685 | 0.76 | 0.68 | 0 | 0 | 0.83 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T10 T10 |
|
21 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2271
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 22.2, geometry warning, and strain ΔE = 22.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 224.2 · logP 1.79 · TPSA 74.6
|
54.8 | 0.48 | 4.0174 | -1.7210 | 0 | 22.22 | 224.2 | 1.79 | 74.6 | 1.890 | 0.76 | 0.72 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 22.2
|
|
| T10 T10 |
|
22 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45956756
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 263.3 · logP 3.82 · TPSA 53.4
|
55.4 | 0.60 | 2.1885 | -1.3239 | 2 | 6.88 | 263.3 | 3.82 | 53.4 | 2.238 | 0.73 | 0.56 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T10 T10 |
|
23 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19703650
reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 4 clashes; 11 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 275.3 · logP 1.46 · TPSA 88.8
|
52.2 | 0.73 | 0.9517 | -1.3898 | 10 | 16.87 | 275.3 | 1.46 | 88.8 | 1.864 | 0.73 | 0.63 | 0 | 0 | 0.81 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 11 protein contact clashes
|
|
| T10 T10 |
|
24 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49718975
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 264.7 · logP 1.99 · TPSA 90.6
|
53.0 | 0.43 | 4.2529 | -1.5084 | 1 | 11.93 | 264.7 | 1.99 | 90.6 | 2.445 | 0.73 | 0.76 | 0 | 0 | 0.45 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T10 T10 |
|
25 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1147226530
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 258.2 · logP 2.45 · TPSA 76.2
|
52.6 | 0.47 | 3.4116 | -1.3511 | 1 | 13.23 | 258.2 | 2.45 | 76.2 | 2.096 | 0.62 | 0.78 | 0 | 0 | 0.89 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 3 protein clashes
|
|
| T10 T10 |
|
26 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_227
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 272.3 · logP 3.44 · TPSA 46.5
|
50.4 | 0.35 | 4.2204 | -1.2245 | 3 | 12.07 | 272.3 | 3.44 | 46.5 | 1.920 | 0.76 | 0.77 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein clashes
|
|
| T10 T10 |
|
27 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z115639094
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 363.2 · logP 3.80 · TPSA 59.1
|
50.3 | 0.45 | 3.1605 | -1.1276 | 0 | 14.47 | 363.2 | 3.80 | 59.1 | 1.860 | 0.62 | 0.58 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T10 T10 |
|
28 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z18921862
clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 10 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 295.3 · logP 2.69 · TPSA 68.5
|
49.0 | 0.53 | 2.4268 | -1.1911 | 9 | 9.25 | 295.3 | 2.69 | 68.5 | 2.026 | 0.76 | 0.63 | 0 | 0 | 0.81 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash
|
|
| T10 T10 |
|
29 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z53035387
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 317.4 · logP 2.13 · TPSA 74.7
|
48.6 | 0.28 | 4.7283 | -1.0971 | 0 | 16.05 | 317.4 | 2.13 | 74.7 | 1.823 | 0.65 | 0.78 | 0 | 0 | 0.94 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein clashes
|
|
| T10 T10 |
|
30 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_2
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 11 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 321.3 · logP 2.85 · TPSA 87.6
|
45.7 | 0.49 | 2.8884 | -1.0183 | 9 | 7.74 | 321.3 | 2.85 | 87.6 | 2.588 | 0.58 | 0.64 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T10 T10 |
|
31 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z276351322
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 238.2 · logP 3.11 · TPSA 59.2
|
47.4 | 0.41 | 3.9606 | -1.3466 | 6 | 5.21 | 238.2 | 3.11 | 59.2 | 1.794 | 0.73 | 0.53 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
|
|
| T10 T10 |
|
32 | 2 Front 2 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK29
native-like contacts, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 342.4 · logP 4.31 · TPSA 69.9
|
41.1 | 0.43 | 3.3614 | -1.0661 | 15 | 9.76 | 342.4 | 4.31 | 69.9 | 2.737 | 0.76 | 0.66 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T10 T10 |
|
33 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2588062695
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: 3 protein clashes; moderate strain Δ 22.2 and strain ΔE = 22.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 198.2 · logP -0.34 · TPSA 107.2
|
61.5 | 0.55 | 3.1503 | -1.7557 | 3 | 22.23 | 198.2 | -0.34 | 107.2 | 3.017 | 0.73 | 0.88 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
3 protein clashes; moderate strain Δ 22.2
|
|
| T10 T10 |
|
34 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49907343
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 7 protein contact clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 280.4 · logP 3.49 · TPSA 46.0
|
58.2 | 0.67 | 0.9683 | -1.2594 | 1 | 14.84 | 280.4 | 3.49 | 46.0 | 2.528 | 0.73 | 0.78 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 7 protein contact clashes
|
|
| T10 T10 |
|
35 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK144
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 191.2 · logP 1.54 · TPSA 66.5
|
57.0 | 0.57 | 2.8010 | -1.7374 | 1 | 9.78 | 191.2 | 1.54 | 66.5 | 2.097 | 0.76 | 0.77 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 3 protein clashes
|
|
| T10 T10 |
|
36 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z995094004
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 4 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 202.6 · logP 1.07 · TPSA 49.7
|
56.7 | 0.60 | 2.8159 | -1.9085 | 2 | 15.64 | 202.6 | 1.07 | 49.7 | 2.102 | 0.76 | 0.82 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 4 protein clashes
|
|
| T10 T10 |
|
37 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0139
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 2 protein clashes; moderate strain Δ 25.5, geometry warning, and strain ΔE = 25.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 225.2 · logP -0.48 · TPSA 97.0
|
55.0 | 0.65 | 2.0421 | -1.5833 | 1 | 25.51 | 225.2 | -0.48 | 97.0 | 4.125 | 0.73 | 0.68 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 2 protein clashes; moderate strain Δ 25.5
|
|
| T10 T10 |
|
38 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0249
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 1 protein clash; moderate strain Δ 27.3, geometry warning, and strain ΔE = 27.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 247.7 · logP 0.61 · TPSA 98.5
|
56.6 | 0.69 | 1.7483 | -1.5920 | 1 | 27.32 | 247.7 | 0.61 | 98.5 | 2.271 | 0.73 | 0.59 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 1 protein clash; moderate strain Δ 27.3
|
|
| T10 T10 |
|
39 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z372953774
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 3 protein clashes; moderate strain Δ 23.7, geometry warning, and strain ΔE = 23.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 215.2 · logP 1.56 · TPSA 79.6
|
56.1 | 0.58 | 2.9786 | -1.6518 | 0 | 23.67 | 215.2 | 1.56 | 79.6 | 2.602 | 0.70 | 0.77 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 3 protein clashes; moderate strain Δ 23.7
|
|
| T10 T10 |
|
40 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z28179969
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 10 protein contact clashes, geometry warning, and strain ΔE = 19.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 352.5 · logP 3.59 · TPSA 79.6
|
55.5 | 0.75 | 0.9688 | -1.1237 | 6 | 19.43 | 352.5 | 3.59 | 79.6 | 2.688 | 0.58 | 0.72 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 10 protein contact clashes
|
|
| T10 T10 |
|
41 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC345
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 222.2 · logP -0.19 · TPSA 107.0
|
55.0 | 0.55 | 3.5204 | -1.7721 | 2 | 12.89 | 222.2 | -0.19 | 107.0 | 3.167 | 0.73 | 0.80 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 3 protein clashes
|
|
| T10 T10 |
|
42 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49547294
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 24.6, geometry warning, and strain ΔE = 24.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 257.2 · logP 1.26 · TPSA 94.8
|
54.7 | 0.69 | 2.3565 | -1.6572 | 7 | 24.57 | 257.2 | 1.26 | 94.8 | 2.196 | 0.73 | 0.75 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 24.6
|
|
| T10 T10 |
|
43 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19456127
well-buried hydrophobics, native-like contacts, clean safety profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 278.3 · logP 2.15 · TPSA 74.5
|
54.4 | 0.58 | 2.0710 | -1.3222 | 3 | 16.51 | 278.3 | 2.15 | 74.5 | 2.309 | 0.76 | 0.69 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 1 protein clash
|
|
| T10 T10 |
|
44 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_3082
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 20.6, geometry warning, and strain ΔE = 20.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 273.2 · logP 0.90 · TPSA 128.4
|
50.4 | 0.45 | 3.4075 | -1.2208 | 0 | 20.61 | 273.2 | 0.90 | 128.4 | 2.292 | 0.70 | 0.55 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 20.6
|
|
| T10 T10 |
|
45 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC270
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 281.3 · logP 2.60 · TPSA 71.2
|
50.3 | 0.33 | 4.5654 | -1.3446 | 1 | 11.47 | 281.3 | 2.60 | 71.2 | 2.084 | 0.73 | 0.80 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
|
|
| T10 T10 |
|
46 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56821783
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 331.4 · logP 2.06 · TPSA 75.8
|
51.0 | 0.59 | 2.0462 | -1.2153 | 4 | 15.75 | 331.4 | 2.06 | 75.8 | 2.217 | 0.58 | 0.67 | 0 | 0 | 0.82 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T10 T10 |
|
47 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z966775152
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 254.2 · logP 2.41 · TPSA 86.5
|
51.4 | 0.46 | 3.1835 | -1.2703 | 0 | 17.62 | 254.2 | 2.41 | 86.5 | 2.109 | 0.70 | 0.61 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T10 T10 |
|
48 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_273
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 270.7 · logP 3.24 · TPSA 63.8
|
53.7 | 0.57 | 2.6401 | -1.4010 | 0 | 15.62 | 270.7 | 3.24 | 63.8 | 1.925 | 0.67 | 0.68 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T10 T10 |
|
49 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_272
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 270.7 · logP 3.24 · TPSA 63.8
|
54.1 | 0.58 | 2.5869 | -1.4236 | 0 | 15.76 | 270.7 | 3.24 | 63.8 | 1.860 | 0.67 | 0.68 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T10 T10 |
|
50 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC272
native-like contacts, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 254.3 · logP 2.46 · TPSA 61.7
|
48.6 | 0.45 | 3.3518 | -1.3142 | 9 | 9.63 | 254.3 | 2.46 | 61.7 | 1.781 | 0.76 | 0.78 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
|
|
| T10 T10 |
|
51 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z25403962
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 324.4 · logP 4.45 · TPSA 61.6
|
46.7 | 0.36 | 4.2743 | -1.0951 | 7 | 9.98 | 324.4 | 4.45 | 61.6 | 2.028 | 0.62 | 0.83 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 3 protein clashes
|
|
| T10 T10 |
|
52 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49539235
reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 9 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 321.2 · logP 3.01 · TPSA 70.4
|
49.9 | 0.58 | 2.2748 | -1.2729 | 7 | 13.91 | 321.2 | 3.01 | 70.4 | 2.368 | 0.65 | 0.64 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash
|
|
| T10 T10 |
|
53 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0153
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 3 protein clashes; moderate strain Δ 23.9, geometry warning, and strain ΔE = 23.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 225.2 · logP -0.65 · TPSA 97.0
|
49.0 | 0.38 | 4.7650 | -1.6471 | 0 | 23.86 | 225.2 | -0.65 | 97.0 | 4.247 | 0.73 | 0.78 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 3 protein clashes; moderate strain Δ 23.9
|
|
| T10 T10 |
|
54 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56832158
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 305.4 · logP 4.52 · TPSA 58.0
|
44.9 | 0.41 | 3.3679 | -1.0332 | 7 | 7.89 | 305.4 | 4.52 | 58.0 | 2.136 | 0.62 | 0.64 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T10 T10 |
|
55 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC324
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 304.4 · logP 1.97 · TPSA 72.2
|
45.9 | 0.41 | 3.6149 | -1.2194 | 10 | 8.78 | 304.4 | 1.97 | 72.2 | 1.702 | 0.73 | 0.73 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes
|
|
| T10 T10 |
|
56 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56779935
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 293.3 · logP 1.69 · TPSA 106.1
|
43.0 | 0.20 | 5.7013 | -1.1377 | 9 | 7.02 | 293.3 | 1.69 | 106.1 | 2.233 | 0.73 | 0.90 | 0 | 0 | 0.40 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 3 protein clashes
|
|
| T10 T10 |
|
57 | 3 Front 3 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC271
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 297.3 · logP 2.30 · TPSA 91.4
|
48.5 | 0.47 | 3.0380 | -1.1326 | 8 | 7.82 | 297.3 | 2.30 | 91.4 | 2.229 | 0.70 | 0.74 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T10 T10 |
|
58 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z88883356
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 320.3 · logP 2.51 · TPSA 75.3
|
55.1 | 0.51 | 2.5726 | -1.1230 | 0 | 18.00 | 320.3 | 2.51 | 75.3 | 2.005 | 0.62 | 0.89 | 0 | 0 | 0.91 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T10 T10 |
|
59 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC287
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 234.3 · logP 0.39 · TPSA 97.2
|
55.7 | 0.56 | 3.5104 | -1.8538 | 2 | 15.23 | 234.3 | 0.39 | 97.2 | 2.497 | 0.73 | 0.88 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 3 protein clashes
|
|
| T10 T10 |
|
60 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56781613
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 280.7 · logP 1.50 · TPSA 97.0
|
52.8 | 0.50 | 2.7894 | -1.2482 | 3 | 14.27 | 280.7 | 1.50 | 97.0 | 2.285 | 0.73 | 0.73 | 0 | 0 | 0.83 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 2 protein clashes
|
|
| T10 T10 |
|
61 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0248
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes; moderate strain Δ 27.0, geometry warning, and strain ΔE = 27.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 278.1 · logP 0.41 · TPSA 98.5
|
55.4 | 0.64 | 2.4319 | -1.7295 | 1 | 26.98 | 278.1 | 0.41 | 98.5 | 2.177 | 0.73 | 0.59 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 2 protein clashes; moderate strain Δ 27.0
|
|
| T10 T10 |
|
62 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z25103234
well-buried hydrophobics, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 308.4 · logP 2.59 · TPSA 61.3
|
50.8 | 0.53 | 2.3873 | -1.2368 | 5 | 15.78 | 308.4 | 2.59 | 61.3 | 2.251 | 0.76 | 0.63 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash
|
|
| T10 T10 |
|
63 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30199023
reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 21.4, geometry warning, and strain ΔE = 21.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 325.3 · logP 2.84 · TPSA 77.1
|
49.2 | 0.63 | 2.1513 | -1.1053 | 9 | 21.38 | 325.3 | 2.84 | 77.1 | 2.035 | 0.58 | 0.63 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 21.4
|
|
| T10 T10 |
|
64 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z29467616
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 16 protein contact clashes; moderate strain Δ 24.3, geometry warning, and strain ΔE = 24.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 388.5 · logP 3.09 · TPSA 95.8
|
48.6 | 0.54 | 2.4160 | -1.0105 | 7 | 24.35 | 388.5 | 3.09 | 95.8 | 2.524 | 0.58 | 0.82 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 16 protein contact clashes; moderate strain Δ 24.3
|
|
| T10 T10 |
|
65 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK49
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 5 clashes; 1 protein clash; moderate strain Δ 20.3, geometry warning, and strain ΔE = 20.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 336.5 · logP 4.61 · TPSA 48.2
|
49.1 | 0.56 | 2.0304 | -1.1381 | 7 | 20.27 | 336.5 | 4.61 | 48.2 | 2.958 | 0.73 | 0.68 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 1 protein clash; moderate strain Δ 20.3
|
|
| T10 T10 |
|
66 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z165420976
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 270.3 · logP 1.46 · TPSA 95.4
|
47.3 | 0.46 | 3.4288 | -1.2771 | 8 | 13.21 | 270.3 | 1.46 | 95.4 | 1.632 | 0.73 | 0.62 | 0 | 0 | 0.86 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T10 T10 |
|
67 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57009636
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 315.3 · logP 1.60 · TPSA 88.0
|
47.6 | 0.46 | 3.4257 | -1.2560 | 10 | 10.32 | 315.3 | 1.60 | 88.0 | 2.587 | 0.73 | 0.85 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T10 T10 |
|
68 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z25107081
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 4 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 292.3 · logP 2.64 · TPSA 76.2
|
46.1 | 0.26 | 5.4066 | -1.3620 | 3 | 11.71 | 292.3 | 2.64 | 76.2 | 2.548 | 0.70 | 0.79 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 4 protein clashes
|
|
| T10 T10 |
|
69 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49615771
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 3 protein clashes; moderate strain Δ 29.0, geometry warning, and strain ΔE = 29.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 256.3 · logP 1.86 · TPSA 81.9
|
49.9 | 0.55 | 3.8163 | -1.6655 | 8 | 29.02 | 256.3 | 1.86 | 81.9 | 1.892 | 0.73 | 0.74 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 3 protein clashes; moderate strain Δ 29.0
|
|
| T10 T10 |
|
70 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1515385080
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 3 protein clashes; high strain Δ 38.8, geometry warning, and strain ΔE = 38.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 310.3 · logP 0.30 · TPSA 119.7
|
45.0 | 0.33 | 4.5166 | -1.1738 | 0 | 38.78 | 310.3 | 0.30 | 119.7 | 2.909 | 0.67 | 0.83 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 8 clashes; 3 protein clashes; high strain Δ 38.8
|
|
| T10 T10 |
|
71 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19081445
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 4 clashes; 1 protein clash; moderate strain Δ 22.0, geometry warning, and strain ΔE = 22.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 409.5 · logP 1.78 · TPSA 104.3
|
45.5 | 0.54 | 2.0757 | -0.9458 | 11 | 21.98 | 409.5 | 1.78 | 104.3 | 2.417 | 0.66 | 0.71 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 1 protein clash; moderate strain Δ 22.0
|
|
| T10 T10 |
|
72 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49615969
native-like contacts, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 282.3 · logP 3.28 · TPSA 61.7
|
49.1 | 0.56 | 1.9976 | -1.2287 | 11 | 18.21 | 282.3 | 3.28 | 61.7 | 1.832 | 0.76 | 0.81 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash
|
|
| T10 T10 |
|
73 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_50
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 252.3 · logP 2.16 · TPSA 74.7
|
48.4 | 0.49 | 3.0763 | -1.3644 | 5 | 8.76 | 252.3 | 2.16 | 74.7 | 2.303 | 0.73 | 0.52 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T10 T10 |
|
74 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC280
native-like contacts, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 21.6, geometry warning, and strain ΔE = 21.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 254.3 · logP 2.46 · TPSA 61.7
|
49.5 | 0.59 | 1.6595 | -1.2804 | 8 | 21.57 | 254.3 | 2.46 | 61.7 | 1.849 | 0.76 | 0.66 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash; moderate strain Δ 21.6
|
|
| T10 T10 |
|
75 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z27776449
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 11 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 359.2 · logP 2.40 · TPSA 86.9
|
43.1 | 0.50 | 3.0649 | -1.1579 | 8 | 16.75 | 359.2 | 2.40 | 86.9 | 2.151 | 0.52 | 0.68 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T10 T10 |
|
76 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49724509
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash; high strain Δ 32.8, geometry warning, and strain ΔE = 32.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 409.3 · logP 4.56 · TPSA 85.4
|
43.6 | 0.69 | 1.8894 | -1.4560 | 11 | 32.83 | 409.3 | 4.56 | 85.4 | 2.993 | 0.40 | 0.81 | 0 | 0 | 0.29 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash; high strain Δ 32.8
|
|
| T10 T10 |
|
77 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z115639322
reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 7 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 324.8 · logP 3.75 · TPSA 59.1
|
46.6 | 0.60 | 1.8342 | -1.2263 | 9 | 19.46 | 324.8 | 3.75 | 59.1 | 2.121 | 0.62 | 0.59 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 1 protein clash
|
|
| T10 T10 |
|
78 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC275
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 299.3 · logP 2.74 · TPSA 71.2
|
49.9 | 0.33 | 4.4896 | -1.2791 | 1 | 13.77 | 299.3 | 2.74 | 71.2 | 2.156 | 0.73 | 0.80 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
|
|
| T10 T10 |
|
79 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z21488718
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 294.3 · logP 3.30 · TPSA 75.6
|
47.8 | 0.42 | 3.3781 | -1.1737 | 8 | 8.17 | 294.3 | 3.30 | 75.6 | 2.188 | 0.70 | 0.83 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T10 T10 |
|
80 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0527
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 1 protein clash, geometry warning, and tox alerts x2.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 276.3 · logP 2.33 · TPSA 110.9
|
42.9 | 0.57 | 2.5492 | -1.4088 | 6 | 16.36 | 276.3 | 2.33 | 110.9 | 2.222 | 0.39 | 0.81 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x2, Geometry warning, geometry warning; 8 clashes; 1 protein clash
|
|
| T10 T10 |
|
81 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC394
native-like contacts
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 13 clashes; 7 protein contact clashes; moderate strain Δ 23.0, geometry warning, and strain ΔE = 23.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 428.5 · logP 4.30 · TPSA 108.8
|
43.0 | 0.66 | 1.5403 | -1.0769 | 14 | 23.03 | 428.5 | 4.30 | 108.8 | 3.809 | 0.48 | 0.85 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 7 protein contact clashes; moderate strain Δ 23.0
|
|
| T10 T10 |
|
82 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z115639370
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 7 clashes; 2 protein clashes, geometry warning, and strain ΔE = 19.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 369.3 · logP 3.86 · TPSA 59.1
|
44.8 | 0.52 | 2.6778 | -1.2468 | 9 | 19.38 | 369.3 | 3.86 | 59.1 | 2.166 | 0.62 | 0.63 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes
|
|
| T10 T10 |
|
83 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56773008
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 340.4 · logP 4.07 · TPSA 69.3
|
37.6 | 0.34 | 4.6460 | -1.1761 | 15 | 11.07 | 340.4 | 4.07 | 69.3 | 2.377 | 0.62 | 0.74 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 3 protein clashes
|
|
| T10 T10 |
|
84 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z46033738
native-like contacts, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 4 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 292.3 · logP 3.93 · TPSA 57.5
|
37.8 | 0.20 | 5.0234 | -1.0872 | 12 | 11.57 | 292.3 | 3.93 | 57.5 | 2.282 | 0.76 | 0.76 | 0 | 0 | 0.82 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 4 protein clashes
|
|
| T10 T10 |
|
85 | 4 Front 4 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z28180197
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 4 protein clashes, geometry warning, and strain ΔE = 19.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 360.5 · logP 3.95 · TPSA 79.6
|
38.1 | 0.19 | 6.0098 | -0.9947 | 10 | 19.61 | 360.5 | 3.95 | 79.6 | 2.436 | 0.58 | 0.82 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 4 protein clashes
|
|
| T10 T10 |
|
86 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1274773112
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 20.4, geometry warning, and strain ΔE = 20.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 205.2 · logP 0.52 · TPSA 92.0
|
57.5 | 0.63 | 2.1418 | -1.6128 | 1 | 20.38 | 205.2 | 0.52 | 92.0 | 2.641 | 0.73 | 0.85 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 20.4
|
|
| T10 T10 |
|
87 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45636695
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 3 protein clashes; moderate strain Δ 22.0, geometry warning, and strain ΔE = 22.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 215.2 · logP 0.76 · TPSA 83.5
|
55.6 | 0.54 | 3.2865 | -1.7365 | 2 | 22.01 | 215.2 | 0.76 | 83.5 | 1.577 | 0.73 | 0.85 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 3 protein clashes; moderate strain Δ 22.0
|
|
| T10 T10 |
|
88 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z53223394
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 312.4 · logP 0.32 · TPSA 118.0
|
51.1 | 0.49 | 2.8786 | -1.2098 | 5 | 17.33 | 312.4 | 0.32 | 118.0 | 2.865 | 0.73 | 0.81 | 0 | 0 | 0.75 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 2 protein clashes
|
|
| T10 T10 |
|
89 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_491
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 21.1, geometry warning, and strain ΔE = 21.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 285.3 · logP 0.89 · TPSA 94.2
|
49.3 | 0.50 | 2.7034 | -1.2052 | 8 | 21.08 | 285.3 | 0.89 | 94.2 | 2.014 | 0.73 | 0.84 | 0 | 0 | 0.87 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 21.1
|
|
| T10 T10 |
|
90 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z31309289
native-like contacts, clean safety profile, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 274.3 · logP 2.90 · TPSA 62.4
|
48.5 | 0.46 | 2.8539 | -1.2217 | 9 | 12.02 | 274.3 | 2.90 | 62.4 | 2.104 | 0.76 | 0.87 | 0 | 0 | 0.62 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash
|
|
| T10 T10 |
|
91 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z29467292
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 16 protein contact clashes, geometry warning, and strain ΔE = 18.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 349.4 · logP 2.82 · TPSA 102.0
|
51.0 | 0.53 | 2.2973 | -1.1157 | 2 | 18.90 | 349.4 | 2.82 | 102.0 | 2.678 | 0.58 | 0.81 | 0 | 0 | 0.45 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 16 protein contact clashes
|
|
| T10 T10 |
|
92 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49646854
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 22.9, geometry warning, and strain ΔE = 22.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 407.3 · logP 4.08 · TPSA 58.5
|
46.5 | 0.48 | 2.8378 | -1.1253 | 1 | 22.86 | 407.3 | 4.08 | 58.5 | 2.443 | 0.46 | 0.63 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 22.9
|
|
| T10 T10 |
|
93 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0824
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes, geometry warning, and strain ΔE = 18.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 266.3 · logP 0.15 · TPSA 117.9
|
46.3 | 0.42 | 3.8049 | -1.3645 | 4 | 18.39 | 266.3 | 0.15 | 117.9 | 2.355 | 0.73 | 0.48 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes
|
|
| T10 T10 |
|
94 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC250
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 297.3 · logP 1.72 · TPSA 83.0
|
46.3 | 0.43 | 3.6623 | -1.2612 | 10 | 12.21 | 297.3 | 1.72 | 83.0 | 2.811 | 0.73 | 0.84 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T10 T10 |
|
95 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49719002
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 8 clashes; 3 protein clashes, geometry warning, and strain ΔE = 18.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 280.7 · logP 1.69 · TPSA 110.9
|
49.5 | 0.50 | 3.5973 | -1.5569 | 5 | 18.43 | 280.7 | 1.69 | 110.9 | 2.708 | 0.70 | 0.78 | 0 | 0 | 0.39 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 3 protein clashes
|
|
| T10 T10 |
|
96 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z51114828
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 359.4 · logP 1.49 · TPSA 90.0
|
44.9 | 0.42 | 3.1737 | -0.9732 | 9 | 14.19 | 359.4 | 1.49 | 90.0 | 2.368 | 0.73 | 0.63 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T10 T10 |
|
97 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z275164792
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 321.2 · logP 2.63 · TPSA 64.3
|
44.4 | 0.50 | 2.8156 | -1.2799 | 8 | 17.79 | 321.2 | 2.63 | 64.3 | 1.801 | 0.59 | 0.73 | 0 | 0 | 0.52 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T10 T10 |
|
98 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19696461
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 352.4 · logP 2.97 · TPSA 80.9
|
42.0 | 0.13 | 5.6845 | -0.9704 | 2 | 15.92 | 352.4 | 2.97 | 80.9 | 2.304 | 0.70 | 0.75 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 3 protein clashes
|
|
| T10 T10 |
|
99 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49547116
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 28.6, geometry warning, and strain ΔE = 28.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 310.1 · logP 2.86 · TPSA 74.6
|
45.5 | 0.51 | 3.0005 | -1.2514 | 8 | 28.56 | 310.1 | 2.86 | 74.6 | 2.236 | 0.65 | 0.61 | 0 | 0 | 0.68 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes; moderate strain Δ 28.6
|
|
| T10 T10 |
|
100 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z27749333
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 22.6, geometry warning, and strain ΔE = 22.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 358.5 · logP 2.55 · TPSA 66.5
|
41.0 | 0.53 | 2.0013 | -0.9779 | 13 | 22.64 | 358.5 | 2.55 | 66.5 | 2.213 | 0.65 | 0.55 | 0 | 0 | 0.89 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 22.6
|
|
| T10 T10 |
|
101 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2500
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 278.3 · logP 4.97 · TPSA 54.2
|
39.3 | 0.52 | 2.5728 | -1.1942 | 10 | 11.95 | 278.3 | 4.97 | 54.2 | 2.118 | 0.45 | 0.59 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T10 T10 |
|
102 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z31261051
reasonable synthesis profile
DetailsWhy selected: Good docking score, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 5 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 400.0 · logP 4.39 · TPSA 72.0
|
40.2 | 0.55 | 1.8667 | -1.0336 | 11 | 19.51 | 400.0 | 4.39 | 72.0 | 2.605 | 0.43 | 0.63 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 1 protein clash
|
|
| T10 T10 |
|
103 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_chagas_214
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 414.4 · logP 2.98 · TPSA 80.0
|
37.1 | 0.30 | 4.0418 | -0.8049 | 7 | 17.03 | 414.4 | 2.98 | 80.0 | 3.544 | 0.44 | 0.72 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T10 T10 |
|
104 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56857031
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 23.1, geometry warning, and strain ΔE = 23.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 304.4 · logP 2.82 · TPSA 88.1
|
40.6 | 0.52 | 2.7652 | -1.2322 | 8 | 23.13 | 304.4 | 2.82 | 88.1 | 2.235 | 0.34 | 0.81 | 0 | 0 | 0.88 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 23.1
|
|
| T10 T10 |
|
105 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_49
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 9 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 317.4 · logP 2.91 · TPSA 87.6
|
40.8 | 0.36 | 4.1924 | -1.1356 | 10 | 9.01 | 317.4 | 2.91 | 87.6 | 2.533 | 0.58 | 0.70 | 0 | 0 | 0.60 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein clashes
|
|
| T10 T10 |
|
106 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC391
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 12 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 427.5 · logP 4.90 · TPSA 96.0
|
38.5 | 0.49 | 2.6404 | -0.9459 | 14 | 16.57 | 427.5 | 4.90 | 96.0 | 3.855 | 0.48 | 0.80 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T10 T10 |
|
107 | 5 Front 5 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK155
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 13 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 410.5 · logP 4.14 · TPSA 108.8
|
37.6 | 0.43 | 3.9807 | -1.1556 | 15 | 11.94 | 410.5 | 4.14 | 108.8 | 3.506 | 0.48 | 0.85 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 2 protein clashes
|
|
| T10 T10 |
|
108 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z756440056
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 24.5, geometry warning, and strain ΔE = 24.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 204.2 · logP 1.12 · TPSA 79.1
|
56.5 | 0.59 | 2.5734 | -1.6344 | 1 | 24.48 | 204.2 | 1.12 | 79.1 | 2.301 | 0.73 | 0.83 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 24.5
|
|
| T10 T10 |
|
109 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19651549
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes, geometry warning, and strain ΔE = 18.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 301.3 · logP 3.21 · TPSA 83.6
|
52.0 | 0.48 | 3.5442 | -1.5016 | 2 | 18.32 | 301.3 | 3.21 | 83.6 | 2.149 | 0.70 | 0.80 | 0 | 0 | 0.44 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T10 T10 |
|
110 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49536372
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 23.1, geometry warning, and strain ΔE = 23.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 278.3 · logP 3.70 · TPSA 64.9
|
53.3 | 0.53 | 2.5630 | -1.2719 | 1 | 23.11 | 278.3 | 3.70 | 64.9 | 2.114 | 0.73 | 0.69 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 23.1
|
|
| T10 T10 |
|
111 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0301
well-buried hydrophobics
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 23.5, geometry warning, and strain ΔE = 23.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 311.2 · logP 1.79 · TPSA 78.4
|
48.3 | 0.50 | 3.1277 | -1.3977 | 3 | 23.46 | 311.2 | 1.79 | 78.4 | 4.083 | 0.73 | 0.64 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 23.5
|
|
| T10 T10 |
|
112 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z243733256
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 291.3 · logP 2.05 · TPSA 83.5
|
49.7 | 0.46 | 3.7548 | -1.4255 | 7 | 16.33 | 291.3 | 2.05 | 83.5 | 1.621 | 0.73 | 0.80 | 0 | 0 | 0.91 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes
|
|
| T10 T10 |
|
113 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56792679
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 23.7, geometry warning, and strain ΔE = 23.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 283.3 · logP 2.41 · TPSA 83.1
|
48.0 | 0.54 | 2.3241 | -1.2056 | 8 | 23.71 | 283.3 | 2.41 | 83.1 | 2.725 | 0.70 | 0.78 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 23.7
|
|
| T10 T10 |
|
114 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56891526
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 1 protein clash; moderate strain Δ 26.1, geometry warning, and strain ΔE = 26.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 279.3 · logP 1.39 · TPSA 90.3
|
49.0 | 0.60 | 1.5863 | -1.2965 | 6 | 26.14 | 279.3 | 1.39 | 90.3 | 3.061 | 0.73 | 0.66 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 1 protein clash; moderate strain Δ 26.1
|
|
| T10 T10 |
|
115 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45690049
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 23.0, geometry warning, and strain ΔE = 23.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 291.3 · logP 2.50 · TPSA 74.8
|
50.0 | 0.52 | 2.5697 | -1.2163 | 6 | 22.99 | 291.3 | 2.50 | 74.8 | 2.276 | 0.73 | 0.77 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 23.0
|
|
| T10 T10 |
|
116 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z55928790
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 5 clashes; 11 protein contact clashes; moderate strain Δ 28.5, geometry warning, and strain ΔE = 28.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 317.4 · logP 3.17 · TPSA 65.2
|
47.1 | 0.60 | 1.3630 | -1.0835 | 8 | 28.46 | 317.4 | 3.17 | 65.2 | 2.209 | 0.62 | 0.72 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 11 protein contact clashes; moderate strain Δ 28.5
|
|
| T10 T10 |
|
117 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z594284200
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 3 protein clashes; moderate strain Δ 21.4, geometry warning, and strain ΔE = 21.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 255.2 · logP -1.97 · TPSA 139.3
|
46.0 | 0.37 | 4.2190 | -1.3356 | 4 | 21.41 | 255.2 | -1.97 | 139.3 | 2.998 | 0.66 | 0.75 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 3 protein clashes; moderate strain Δ 21.4
|
|
| T10 T10 |
|
118 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_171
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 9 protein contact clashes; moderate strain Δ 20.8, geometry warning, and strain ΔE = 20.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 373.5 · logP 3.25 · TPSA 89.0
|
48.3 | 0.59 | 1.2878 | -0.9951 | 7 | 20.83 | 373.5 | 3.25 | 89.0 | 2.132 | 0.58 | 0.75 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 9 protein contact clashes; moderate strain Δ 20.8
|
|
| T10 T10 |
|
119 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC1_139
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 279.3 · logP 2.88 · TPSA 72.0
|
46.2 | 0.48 | 3.0144 | -1.3038 | 8 | 17.63 | 279.3 | 2.88 | 72.0 | 2.945 | 0.73 | 0.71 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 2 protein clashes
|
|
| T10 T10 |
|
120 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z227838904
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 3 protein clashes; moderate strain Δ 27.3, geometry warning, and strain ΔE = 27.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 317.8 · logP 2.90 · TPSA 83.5
|
45.3 | 0.44 | 3.6913 | -1.3074 | 5 | 27.33 | 317.8 | 2.90 | 83.5 | 1.972 | 0.62 | 0.61 | 0 | 0 | 0.91 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 3 protein clashes; moderate strain Δ 27.3
|
|
| T10 T10 |
|
121 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56789391
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 328.3 · logP 2.78 · TPSA 102.2
|
45.0 | 0.51 | 3.5109 | -1.5379 | 9 | 13.25 | 328.3 | 2.78 | 102.2 | 2.464 | 0.55 | 0.82 | 0 | 0 | 0.44 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes
|
|
| T10 T10 |
|
122 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_108
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 14 clashes; 3 protein clashes, geometry warning, and strain ΔE = 18.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 424.3 · logP 2.94 · TPSA 113.2
|
40.7 | 0.25 | 4.6192 | -0.9408 | 6 | 18.37 | 424.3 | 2.94 | 113.2 | 2.542 | 0.58 | 0.79 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 3 protein clashes
|
|
| T10 T10 |
|
123 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30857987
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 352.8 · logP 1.89 · TPSA 89.3
|
44.0 | 0.33 | 3.9344 | -1.0603 | 10 | 12.10 | 352.8 | 1.89 | 89.3 | 1.746 | 0.70 | 0.85 | 0 | 0 | 0.83 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 3 protein clashes
|
|
| T10 T10 |
|
124 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z17792562
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 7 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 333.8 · logP 2.69 · TPSA 72.7
|
40.6 | 0.39 | 3.5722 | -1.0485 | 9 | 17.24 | 333.8 | 2.69 | 72.7 | 2.861 | 0.65 | 0.57 | 0 | 0 | 0.93 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
|
|
| T10 T10 |
|
125 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0368
well-buried hydrophobics, reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 21.0, geometry warning, and strain ΔE = 21.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 282.3 · logP -0.14 · TPSA 138.2
|
40.8 | 0.35 | 4.7221 | -1.3932 | 4 | 21.00 | 282.3 | -0.14 | 138.2 | 2.663 | 0.60 | 0.59 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 21.0
|
|
| T10 T10 |
|
126 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49614230
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 298.3 · logP 1.43 · TPSA 110.4
|
40.9 | 0.24 | 5.4258 | -1.2135 | 9 | 13.47 | 298.3 | 1.43 | 110.4 | 2.505 | 0.73 | 0.75 | 0 | 0 | 0.44 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 3 protein clashes
|
|
| T10 T10 |
|
127 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z18509545
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 13 clashes; 1 protein clash, geometry warning, and strain ΔE = 18.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 410.5 · logP 2.78 · TPSA 84.9
|
38.9 | 0.49 | 2.5830 | -0.9302 | 14 | 18.09 | 410.5 | 2.78 | 84.9 | 2.948 | 0.55 | 0.68 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 1 protein clash
|
|
| T10 T10 |
|
128 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC369
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 11 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 427.5 · logP 3.96 · TPSA 100.6
|
43.2 | 0.48 | 2.7742 | -0.9947 | 12 | 15.27 | 427.5 | 3.96 | 100.6 | 3.829 | 0.66 | 0.85 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T10 T10 |
|
129 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK37
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 13 clashes; 9 protein contact clashes; moderate strain Δ 21.8, geometry warning, and strain ΔE = 21.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 366.5 · logP 4.53 · TPSA 47.9
|
39.7 | 0.51 | 2.0115 | -0.8851 | 15 | 21.83 | 366.5 | 4.53 | 47.9 | 2.802 | 0.58 | 0.75 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 9 protein contact clashes; moderate strain Δ 21.8
|
|
| T10 T10 |
|
130 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z16211652
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 389.9 · logP 4.00 · TPSA 88.2
|
38.3 | 0.24 | 5.1552 | -1.0693 | 9 | 15.86 | 389.9 | 4.00 | 88.2 | 2.158 | 0.51 | 0.85 | 0 | 0 | 0.38 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes
|
|
| T10 T10 |
|
131 | 6 Front 6 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC487
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 12 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 427.5 · logP 3.96 · TPSA 100.6
|
38.6 | 0.36 | 4.2161 | -1.0411 | 14 | 13.79 | 427.5 | 3.96 | 100.6 | 3.829 | 0.66 | 0.83 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes
|
|
| T10 T10 |
|
132 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56785135
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 1 protein clash; moderate strain Δ 26.7, geometry warning, and strain ΔE = 26.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 272.3 · logP 2.28 · TPSA 75.3
|
52.8 | 0.57 | 1.6982 | -1.2015 | 1 | 26.71 | 272.3 | 2.28 | 75.3 | 3.239 | 0.73 | 0.74 | 0 | 0 | 0.82 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 1 protein clash; moderate strain Δ 26.7
|
|
| T10 T10 |
|
133 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49728376
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash; high strain Δ 31.8, geometry warning, and strain ΔE = 31.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 328.3 · logP 1.69 · TPSA 89.4
|
53.1 | 0.51 | 2.6252 | -1.1020 | 1 | 31.81 | 328.3 | 1.69 | 89.4 | 2.685 | 0.73 | 0.81 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; high strain Δ 31.8
|
|
| T10 T10 |
|
134 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC1_32
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 2 protein clashes; moderate strain Δ 23.9, geometry warning, and strain ΔE = 23.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 236.3 · logP 2.51 · TPSA 77.8
|
47.2 | 0.44 | 3.5594 | -1.4238 | 5 | 23.88 | 236.3 | 2.51 | 77.8 | 2.673 | 0.73 | 0.75 | 0 | 0 | 0.56 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 2 protein clashes; moderate strain Δ 23.9
|
|
| T10 T10 |
|
135 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_3273
54% of hydrophobic surface appears solvent-exposed (7/13 atoms). Partial exposure is common but may limit selectivity and membrane permeability.
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 5 clashes; 3 protein clashes; high strain Δ 34.9 and strain ΔE = 34.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 265.3 · logP -0.81 · TPSA 91.2
|
45.6 | 0.35 | 4.2835 | -1.2607 | 7 | 34.93 | 265.3 | -0.81 | 91.2 | 5.236 | 0.70 | 0.60 | 0 | 0 | 0.49 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
geometry warning; 5 clashes; 3 protein clashes; high strain Δ 34.9
|
|
| T10 T10 |
|
136 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z193095380
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash; high strain Δ 34.3, geometry warning, and strain ΔE = 34.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 333.4 · logP 2.67 · TPSA 64.6
|
46.1 | 0.54 | 2.3307 | -1.1177 | 9 | 34.33 | 333.4 | 2.67 | 64.6 | 2.379 | 0.65 | 0.79 | 0 | 0 | 0.91 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; high strain Δ 34.3
|
|
| T10 T10 |
|
137 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0430
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; high strain Δ 36.3, geometry warning, and strain ΔE = 36.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 318.4 · logP 2.34 · TPSA 95.8
|
47.8 | 0.40 | 3.7208 | -1.0819 | 2 | 36.29 | 318.4 | 2.34 | 95.8 | 1.984 | 0.62 | 0.79 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; high strain Δ 36.3
|
|
| T10 T10 |
|
138 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z147200608
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 5 clashes; 3 protein clashes; high strain Δ 34.0, geometry warning, and strain ΔE = 34.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 301.3 · logP 1.30 · TPSA 113.8
|
46.3 | 0.44 | 3.8295 | -1.2264 | 8 | 34.02 | 301.3 | 1.30 | 113.8 | 2.474 | 0.70 | 0.83 | 0 | 0 | 0.67 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 3 protein clashes; high strain Δ 34.0
|
|
| T10 T10 |
|
139 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z49615787
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; high strain Δ 52.5, geometry warning, and strain ΔE = 52.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 276.2 · logP 1.55 · TPSA 115.1
|
48.3 | 0.59 | 2.1983 | -1.3518 | 6 | 52.55 | 276.2 | 1.55 | 115.1 | 2.599 | 0.73 | 0.82 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; high strain Δ 52.5
|
|
| T10 T10 |
|
140 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_56
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 21.2, geometry warning, and strain ΔE = 21.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 319.4 · logP 3.68 · TPSA 55.6
|
43.7 | 0.44 | 2.7647 | -0.9967 | 8 | 21.20 | 319.4 | 3.68 | 55.6 | 2.513 | 0.62 | 0.72 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 21.2
|
|
| T10 T10 |
|
141 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45537933
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 22.3, geometry warning, and strain ΔE = 22.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 326.4 · logP 0.81 · TPSA 106.3
|
46.9 | 0.38 | 3.9664 | -1.2018 | 7 | 22.26 | 326.4 | 0.81 | 106.3 | 1.714 | 0.73 | 0.81 | 0 | 0 | 0.85 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 22.3
|
|
| T10 T10 |
|
142 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57705339
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes, geometry warning, and strain ΔE = 18.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 347.8 · logP 4.30 · TPSA 55.4
|
45.2 | 0.41 | 3.5254 | -1.1180 | 7 | 18.08 | 347.8 | 4.30 | 55.4 | 1.770 | 0.62 | 0.73 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes
|
|
| T10 T10 |
|
143 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z133716394
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 27.3, geometry warning, and strain ΔE = 27.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 374.9 · logP 1.81 · TPSA 97.5
|
46.3 | 0.39 | 3.9316 | -1.1776 | 8 | 27.34 | 374.9 | 1.81 | 97.5 | 1.870 | 0.73 | 0.86 | 0 | 0 | 0.86 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 27.3
|
|
| T10 T10 |
|
144 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z18499260
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 3 protein clashes; moderate strain Δ 26.3, geometry warning, and strain ΔE = 26.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 264.3 · logP 1.81 · TPSA 75.3
|
46.8 | 0.40 | 3.9751 | -1.3707 | 6 | 26.28 | 264.3 | 1.81 | 75.3 | 2.213 | 0.73 | 0.82 | 0 | 0 | 0.50 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 3 protein clashes; moderate strain Δ 26.3
|
|
| T10 T10 |
|
145 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC325
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 25.7, geometry warning, and strain ΔE = 25.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 320.4 · logP 1.67 · TPSA 81.4
|
49.4 | 0.47 | 2.9743 | -1.1796 | 3 | 25.67 | 320.4 | 1.67 | 81.4 | 1.711 | 0.70 | 0.65 | 0 | 0 | 0.76 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 25.7
|
|
| T10 T10 |
|
146 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z131156214
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 22.9, geometry warning, and strain ΔE = 22.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 356.8 · logP 3.21 · TPSA 78.3
|
43.1 | 0.45 | 2.7311 | -0.9804 | 10 | 22.86 | 356.8 | 3.21 | 78.3 | 2.176 | 0.58 | 0.80 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 22.9
|
|
| T10 T10 |
|
147 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z31233831
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 26.1, geometry warning, and strain ΔE = 26.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 362.5 · logP 2.61 · TPSA 98.0
|
43.9 | 0.49 | 2.7211 | -1.0824 | 10 | 26.07 | 362.5 | 2.61 | 98.0 | 2.249 | 0.58 | 0.79 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; moderate strain Δ 26.1
|
|
| T10 T10 |
|
148 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_911
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 4 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 311.3 · logP 1.39 · TPSA 93.8
|
42.0 | 0.40 | 3.2793 | -1.0329 | 12 | 17.61 | 311.3 | 1.39 | 93.8 | 2.993 | 0.73 | 0.77 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 2 protein clashes
|
|
| T10 T10 |
|
149 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z2418739356
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 311.8 · logP 3.46 · TPSA 66.4
|
42.1 | 0.41 | 3.5983 | -1.2538 | 8 | 17.81 | 311.8 | 3.46 | 66.4 | 2.005 | 0.65 | 0.57 | 0 | 0 | 0.91 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T10 T10 |
|
150 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_110
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 11 clashes; 8 protein contact clashes; moderate strain Δ 27.1, geometry warning, and strain ΔE = 27.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 436.3 · logP 2.81 · TPSA 122.4
|
45.1 | 0.56 | 1.6835 | -0.9449 | 8 | 27.06 | 436.3 | 2.81 | 122.4 | 2.518 | 0.52 | 0.77 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 8 protein contact clashes; moderate strain Δ 27.1
|
|
| T10 T10 |
|
151 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19455663
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 22.1, geometry warning, and strain ΔE = 22.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 360.4 · logP 3.91 · TPSA 66.6
|
41.8 | 0.31 | 4.6277 | -1.1192 | 8 | 22.08 | 360.4 | 3.91 | 66.6 | 2.252 | 0.73 | 0.65 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 22.1
|
|
| T10 T10 |
|
152 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z27682971
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 9 clashes; 3 protein clashes, geometry warning, and strain ΔE = 19.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 344.3 · logP 1.69 · TPSA 119.5
|
40.0 | 0.21 | 5.2671 | -1.0133 | 10 | 19.04 | 344.3 | 1.69 | 119.5 | 1.899 | 0.70 | 0.84 | 0 | 0 | 0.70 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein clashes
|
|
| T10 T10 |
|
153 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z28352384
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 24.0, geometry warning, and strain ΔE = 24.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 449.4 · logP 5.93 · TPSA 60.5
|
36.8 | 0.42 | 3.2733 | -0.8673 | 10 | 24.00 | 449.4 | 5.93 | 60.5 | 2.588 | 0.25 | 0.84 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash; moderate strain Δ 24.0
|
|
| T10 T10 |
|
154 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z15849136
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 7 clashes; 4 protein clashes, geometry warning, and strain ΔE = 19.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 332.4 · logP 1.61 · TPSA 84.9
|
37.7 | 0.20 | 5.4701 | -1.0125 | 9 | 19.08 | 332.4 | 1.61 | 84.9 | 2.832 | 0.73 | 0.63 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 4 protein clashes
|
|
| T10 T10 |
|
155 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
TC490
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 11 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 394.5 · logP 3.58 · TPSA 92.4
|
37.8 | 0.43 | 3.0578 | -0.9601 | 14 | 16.57 | 394.5 | 3.58 | 92.4 | 3.774 | 0.58 | 0.75 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 1 protein clash
|
|
| T10 T10 |
|
156 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_90
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 22.4, geometry warning, and strain ΔE = 22.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 340.3 · logP 2.70 · TPSA 78.3
|
42.6 | 0.43 | 2.8936 | -0.9659 | 10 | 22.43 | 340.3 | 2.70 | 78.3 | 2.181 | 0.58 | 0.80 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 22.4
|
|
| T10 T10 |
|
157 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK214
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 12 clashes; 1 protein clash, geometry warning, and strain ΔE = 19.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 409.5 · logP 3.80 · TPSA 100.6
|
38.3 | 0.43 | 3.0514 | -0.9373 | 15 | 19.78 | 409.5 | 3.80 | 100.6 | 3.606 | 0.66 | 0.75 | 0 | 0 | 0.61 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash
|
|
| T10 T10 |
|
158 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z18922521
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 13 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 372.8 · logP 2.78 · TPSA 97.7
|
36.8 | 0.23 | 4.8358 | -0.9339 | 10 | 17.89 | 372.8 | 2.78 | 97.7 | 2.131 | 0.62 | 0.66 | 0 | 0 | 0.83 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 3 protein clashes
|
|
| T10 T10 |
|
159 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56174083
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 13 clashes; 1 protein clash and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 354.4 · logP 4.37 · TPSA 58.3
|
33.6 | 0.44 | 2.9237 | -0.9945 | 16 | 17.87 | 354.4 | 4.37 | 58.3 | 2.335 | 0.43 | 0.62 | 0 | 0 | 0.69 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 13 clashes; 1 protein clash
|
|
| T10 T10 |
|
160 | 7 Front 7 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK160
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 12 clashes; 3 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 410.5 · logP 4.14 · TPSA 108.8
|
32.7 | 0.25 | 5.4837 | -1.1167 | 14 | 15.28 | 410.5 | 4.14 | 108.8 | 3.520 | 0.48 | 0.86 | 0 | 0 | 0.55 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 3 protein clashes
|
|
| T10 T10 |
|
161 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30612183
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 1 protein clash; high strain Δ 36.2, geometry warning, and strain ΔE = 36.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 262.3 · logP 3.56 · TPSA 66.0
|
52.6 | 0.53 | 1.9176 | -1.2034 | 1 | 36.16 | 262.3 | 3.56 | 66.0 | 1.817 | 0.73 | 0.83 | 0 | 0 | 0.77 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 1 protein clash; high strain Δ 36.2
|
|
| T10 T10 |
|
162 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2299
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Good docking score, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 7 clashes; 14 protein contact clashes; high strain Δ 32.6, geometry warning, and strain ΔE = 32.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 279.3 · logP -0.70 · TPSA 113.2
|
50.5 | 0.57 | 1.8996 | -1.1843 | 3 | 32.58 | 279.3 | -0.70 | 113.2 | 2.959 | 0.73 | 0.66 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 14 protein contact clashes; high strain Δ 32.6
|
|
| T10 T10 |
|
163 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56919893
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 3 protein clashes; moderate strain Δ 28.3, geometry warning, and strain ΔE = 28.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 369.5 · logP 0.38 · TPSA 106.5
|
46.3 | 0.37 | 4.4158 | -1.2794 | 4 | 28.26 | 369.5 | 0.38 | 106.5 | 2.672 | 0.70 | 0.80 | 0 | 0 | 0.48 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 3 protein clashes; moderate strain Δ 28.3
|
|
| T10 T10 |
|
164 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2311
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 3 clashes; 3 protein clashes, geometry warning, and strain ΔE = 19.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 235.2 · logP 0.15 · TPSA 86.9
|
49.3 | 0.42 | 3.3014 | -1.3932 | 2 | 19.27 | 235.2 | 0.15 | 86.9 | 2.453 | 0.73 | 0.81 | 0 | 0 | 0.66 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 3 clashes; 3 protein clashes
|
|
| T10 T10 |
|
165 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_3262
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 22.9, geometry warning, and strain ΔE = 22.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 281.3 · logP 2.75 · TPSA 79.5
|
45.7 | 0.40 | 3.4312 | -1.1983 | 7 | 22.89 | 281.3 | 2.75 | 79.5 | 1.912 | 0.70 | 0.83 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 22.9
|
|
| T10 T10 |
|
166 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45635483
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 3 protein clashes; high strain Δ 30.3, geometry warning, and strain ΔE = 30.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 368.5 · logP 2.43 · TPSA 106.3
|
44.0 | 0.26 | 5.1420 | -1.1503 | 4 | 30.32 | 368.5 | 2.43 | 106.3 | 1.935 | 0.62 | 0.90 | 0 | 0 | 0.86 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 3 protein clashes; high strain Δ 30.3
|
|
| T10 T10 |
|
167 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44851669
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 12 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 278.3 · logP 3.08 · TPSA 59.4
|
43.0 | 0.37 | 3.8298 | -1.1872 | 9 | 17.66 | 278.3 | 3.08 | 59.4 | 2.121 | 0.73 | 0.69 | 0 | 0 | 0.59 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 2 protein clashes
|
|
| T10 T10 |
|
168 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_1124
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 5 clashes; 3 protein clashes; high strain Δ 35.9, geometry warning, and strain ΔE = 35.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 250.3 · logP 0.87 · TPSA 107.7
|
41.3 | 0.38 | 4.3617 | -1.4228 | 10 | 35.91 | 250.3 | 0.87 | 107.7 | 3.192 | 0.73 | 0.80 | 0 | 0 | 0.53 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 3 protein clashes; high strain Δ 35.9
|
|
| T10 T10 |
|
169 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z237649744
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 21.2, geometry warning, and strain ΔE = 21.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 393.3 · logP 3.81 · TPSA 68.3
|
43.6 | 0.39 | 3.6067 | -1.0860 | 7 | 21.22 | 393.3 | 3.81 | 68.3 | 1.981 | 0.62 | 0.69 | 0 | 0 | 0.73 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 21.2
|
|
| T10 T10 |
|
170 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57088460
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 24.1, geometry warning, and strain ΔE = 24.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 400.3 · logP 3.81 · TPSA 72.5
|
40.5 | 0.42 | 3.1716 | -1.0469 | 10 | 24.12 | 400.3 | 3.81 | 72.5 | 2.381 | 0.65 | 0.61 | 0 | 0 | 0.83 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 24.1
|
|
| T10 T10 |
|
171 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0781
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and well-buried hydrophobics.
Main concern: geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 29.9, geometry warning, and strain ΔE = 29.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 310.3 · logP -0.53 · TPSA 116.2
|
40.0 | 0.39 | 3.7082 | -1.1652 | 6 | 29.88 | 310.3 | -0.53 | 116.2 | 2.366 | 0.67 | 0.57 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 29.9
|
|
| T10 T10 |
|
172 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z45537946
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 22.7, geometry warning, and strain ΔE = 22.7 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 344.4 · logP 0.95 · TPSA 106.3
|
45.8 | 0.34 | 4.3142 | -1.1855 | 7 | 22.65 | 344.4 | 0.95 | 106.3 | 1.784 | 0.73 | 0.81 | 0 | 0 | 0.84 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 22.7
|
|
| T10 T10 |
|
173 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_259
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 24.2, geometry warning, and strain ΔE = 24.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 286.3 · logP 3.07 · TPSA 91.5
|
39.3 | 0.46 | 3.1570 | -1.2573 | 8 | 24.22 | 286.3 | 3.07 | 91.5 | 2.515 | 0.45 | 0.79 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Alerts x1, Geometry warning, geometry warning; 7 clashes; 3 protein clashes; moderate strain Δ 24.2
|
|
| T10 T10 |
|
174 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC1_170
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 28.1, geometry warning, and strain ΔE = 28.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 307.3 · logP 2.41 · TPSA 94.8
|
42.3 | 0.48 | 3.3930 | -1.3561 | 11 | 28.08 | 307.3 | 2.41 | 94.8 | 2.210 | 0.58 | 0.82 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 28.1
|
|
| T10 T10 |
|
175 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_TC1_171
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 25.1, geometry warning, and strain ΔE = 25.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 307.3 · logP 2.41 · TPSA 94.8
|
41.3 | 0.44 | 3.8076 | -1.3274 | 11 | 25.11 | 307.3 | 2.41 | 94.8 | 2.193 | 0.58 | 0.80 | 0 | 0 | 0.51 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; moderate strain Δ 25.1
|
|
| T10 T10 |
|
176 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z30857952
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 11 clashes; 17 protein contact clashes, geometry warning, and strain ΔE = 18.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 348.4 · logP 1.24 · TPSA 98.5
|
42.8 | 0.41 | 2.8727 | -0.9964 | 11 | 18.17 | 348.4 | 1.24 | 98.5 | 1.743 | 0.70 | 0.77 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 17 protein contact clashes
|
|
| T10 T10 |
|
177 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_Leish_185
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 26.8, geometry warning, and strain ΔE = 26.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 381.4 · logP 3.52 · TPSA 77.7
|
38.2 | 0.44 | 2.8093 | -0.8904 | 12 | 26.80 | 381.4 | 3.52 | 77.7 | 3.654 | 0.58 | 0.71 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 8 clashes; 1 protein clash; moderate strain Δ 26.8
|
|
| T10 T10 |
|
178 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z1724000893
reasonable synthesis profile
DetailsWhy selected: Some docking support, partial native-contact recall, and good contact coverage.
Main concern: geometry warning; 11 clashes; 2 protein clashes, geometry warning, and strain ΔE = 18.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 348.8 · logP 3.70 · TPSA 68.3
|
43.0 | 0.38 | 3.7115 | -1.0706 | 7 | 18.93 | 348.8 | 3.70 | 68.3 | 1.930 | 0.62 | 0.65 | 0 | 0 | 0.78 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T10 T10 |
|
179 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z32377576
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 20.5, geometry warning, and strain ΔE = 20.5 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 417.9 · logP 0.61 · TPSA 149.4
|
40.0 | 0.28 | 4.3922 | -0.9320 | 9 | 20.54 | 417.9 | 0.61 | 149.4 | 2.006 | 0.56 | 0.83 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 7 clashes; 2 protein clashes; moderate strain Δ 20.5
|
|
| T10 T10 |
|
180 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK62
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 4 clashes; 2 protein clashes; moderate strain Δ 28.0, geometry warning, and strain ΔE = 28.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 366.5 · logP 4.62 · TPSA 57.4
|
42.0 | 0.44 | 2.7123 | -1.0555 | 7 | 27.96 | 366.5 | 4.62 | 57.4 | 3.012 | 0.54 | 0.79 | 0 | 0 | 0.50 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 2 protein clashes; moderate strain Δ 28.0
|
|
| T10 T10 |
|
181 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z25492290
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 25.9, geometry warning, and strain ΔE = 25.9 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 455.6 · logP 3.55 · TPSA 81.1
|
32.6 | 0.42 | 2.8628 | -0.7652 | 19 | 25.91 | 455.6 | 3.55 | 81.1 | 2.887 | 0.44 | 0.85 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 1 protein clash; moderate strain Δ 25.9
|
|
| T10 T10 |
|
182 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK218
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 11 clashes; 2 protein clashes, geometry warning, and strain ΔE = 19.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 423.5 · logP 3.89 · TPSA 100.6
|
36.3 | 0.34 | 4.2739 | -1.0112 | 16 | 19.59 | 423.5 | 3.89 | 100.6 | 3.477 | 0.66 | 0.83 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes
|
|
| T10 T10 |
|
183 | 8 Front 8 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
MK213
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 27.8, geometry warning, and strain ΔE = 27.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 409.5 · logP 3.80 · TPSA 100.6
|
37.8 | 0.42 | 3.4318 | -1.0132 | 15 | 27.77 | 409.5 | 3.80 | 100.6 | 3.511 | 0.66 | 0.83 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 1 protein clash; moderate strain Δ 27.8
|
|
| T10 T10 |
|
184 | 9 Front 9 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
KB_HAT_137
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 1 protein clash; moderate strain Δ 28.4, geometry warning, and strain ΔE = 28.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 281.2 · logP 2.41 · TPSA 81.2
|
52.4 | 0.53 | 2.1976 | -1.2440 | 3 | 28.40 | 281.2 | 2.41 | 81.2 | 2.419 | 0.73 | 0.87 | 0 | 0 | 0.84 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 1 protein clash; moderate strain Δ 28.4
|
|
| T10 T10 |
|
185 | 9 Front 9 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY1026
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 1 protein clash; high strain Δ 36.0, geometry warning, and strain ΔE = 36.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 320.4 · logP 1.85 · TPSA 101.0
|
50.0 | 0.44 | 3.0438 | -1.0788 | 3 | 36.01 | 320.4 | 1.85 | 101.0 | 1.971 | 0.73 | 0.84 | 0 | 0 | 0.90 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 1 protein clash; high strain Δ 36.0
|
|
| T10 T10 |
|
186 | 9 Front 9 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z55329110
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; high strain Δ 30.8, geometry warning, and strain ΔE = 30.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 290.2 · logP -0.20 · TPSA 121.6
|
45.6 | 0.42 | 3.3075 | -1.1834 | 4 | 30.78 | 290.2 | -0.20 | 121.6 | 2.733 | 0.70 | 0.70 | 0 | 0 | 0.65 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; high strain Δ 30.8
|
|
| T10 T10 |
|
187 | 9 Front 9 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_338
well-buried hydrophobics, native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 2 protein clashes; high strain Δ 48.8, geometry warning, and strain ΔE = 48.8 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 274.7 · logP -1.47 · TPSA 124.0
|
44.1 | 0.39 | 3.8682 | -1.3348 | 2 | 48.83 | 274.7 | -1.47 | 124.0 | 3.816 | 0.66 | 0.84 | 0 | 0 | 0.54 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 2 protein clashes; high strain Δ 48.8
|
|
| T10 T10 |
|
188 | 9 Front 9 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z334929348
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 28.3, geometry warning, and strain ΔE = 28.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 347.2 · logP 2.96 · TPSA 92.4
|
42.4 | 0.34 | 4.1553 | -1.2112 | 7 | 28.33 | 347.2 | 2.96 | 92.4 | 2.063 | 0.62 | 0.84 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 2 protein clashes; moderate strain Δ 28.3
|
|
| T10 T10 |
|
189 | 9 Front 9 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_2770
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 14 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 327.3 · logP 1.17 · TPSA 102.8
|
40.9 | 0.33 | 3.6481 | -1.0291 | 9 | 17.28 | 327.3 | 1.17 | 102.8 | 2.475 | 0.70 | 0.72 | 0 | 0 | 0.72 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 14 clashes; 2 protein clashes
|
|
| T10 T10 |
|
190 | 9 Front 9 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z44349777
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 12 clashes; 3 protein clashes; moderate strain Δ 28.6, geometry warning, and strain ΔE = 28.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 387.4 · logP 1.90 · TPSA 131.5
|
39.7 | 0.31 | 4.7432 | -1.0512 | 12 | 28.62 | 387.4 | 1.90 | 131.5 | 2.095 | 0.66 | 0.85 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 12 clashes; 3 protein clashes; moderate strain Δ 28.6
|
|
| T10 T10 |
|
191 | 9 Front 9 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z19673935
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 24.6, geometry warning, and strain ΔE = 24.6 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 352.4 · logP 2.97 · TPSA 80.9
|
46.4 | 0.35 | 3.4985 | -1.0924 | 2 | 24.59 | 352.4 | 2.97 | 80.9 | 2.249 | 0.70 | 0.79 | 0 | 0 | 0.57 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 24.6
|
|
| T10 T10 |
|
192 | 9 Front 9 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z31413736
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 25.1, geometry warning, and strain ΔE = 25.1 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 389.8 · logP 0.89 · TPSA 149.4
|
42.1 | 0.31 | 4.0260 | -0.9868 | 7 | 25.06 | 389.8 | 0.89 | 149.4 | 1.905 | 0.63 | 0.80 | 0 | 0 | 0.71 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes; moderate strain Δ 25.1
|
|
| T10 T10 |
|
193 | 9 Front 9 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z246803428
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 20.2, geometry warning, and strain ΔE = 20.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 328.4 · logP 3.35 · TPSA 68.3
|
42.7 | 0.37 | 3.5824 | -1.0369 | 8 | 20.24 | 328.4 | 3.35 | 68.3 | 1.916 | 0.62 | 0.73 | 0 | 0 | 0.80 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 11 clashes; 2 protein clashes; moderate strain Δ 20.2
|
|
| T10 T10 |
|
194 | 9 Front 9 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
NMT-TY0775
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 10 clashes; 2 protein clashes; high strain Δ 30.3, geometry warning, and strain ΔE = 30.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 322.4 · logP 0.40 · TPSA 153.1
|
40.9 | 0.27 | 4.7820 | -1.1226 | 5 | 30.34 | 322.4 | 0.40 | 153.1 | 2.221 | 0.60 | 0.79 | 0 | 0 | 0.64 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 10 clashes; 2 protein clashes; high strain Δ 30.3
|
|
| T10 T10 |
|
195 | 9 Front 9 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z56872897
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 4 clashes; 4 protein clashes; high strain Δ 68.3, geometry warning, and strain ΔE = 68.3 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 328.3 · logP 0.68 · TPSA 162.9
|
34.9 | 0.11 | 6.0692 | -1.0964 | 1 | 68.35 | 328.3 | 0.68 | 162.9 | 2.646 | 0.60 | 0.82 | 0 | 0 | 0.47 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 4 clashes; 4 protein clashes; high strain Δ 68.3
|
|
| T10 T10 |
|
196 | 10 Front 10 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z104497306
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 30.0, geometry warning, and strain ΔE = 30.0 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 265.3 · logP 0.45 · TPSA 124.0
|
46.5 | 0.39 | 4.0075 | -1.4741 | 4 | 29.99 | 265.3 | 0.45 | 124.0 | 2.092 | 0.70 | 0.83 | 0 | 0 | 0.74 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes; moderate strain Δ 30.0
|
|
| T10 T10 |
|
197 | 10 Front 10 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z57329641
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 5 clashes; 3 protein clashes; high strain Δ 42.2, geometry warning, and strain ΔE = 42.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 300.3 · logP 1.77 · TPSA 99.6
|
46.7 | 0.38 | 4.2444 | -1.2388 | 4 | 42.20 | 300.3 | 1.77 | 99.6 | 2.518 | 0.73 | 0.86 | 0 | 0 | 0.58 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 5 clashes; 3 protein clashes; high strain Δ 42.2
|
|
| T10 T10 |
|
198 | 10 Front 10 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
ulfkktlib_626
well-buried hydrophobics, native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and well-buried hydrophobics.
Main concern: geometry warning; 6 clashes; 3 protein clashes; high strain Δ 31.4, geometry warning, and strain ΔE = 31.4 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 343.5 · logP 1.71 · TPSA 110.9
|
45.5 | 0.35 | 4.0239 | -1.2177 | 5 | 31.37 | 343.5 | 1.71 | 110.9 | 2.415 | 0.73 | 0.85 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 6 clashes; 3 protein clashes; high strain Δ 31.4
|
|
| T10 T10 |
|
199 | 10 Front 10 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
Z25217831
native-like contacts, reasonable synthesis profile
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 9 clashes; 2 protein clashes and geometry warning.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 306.3 · logP 2.86 · TPSA 76.0
|
43.0 | 0.33 | 3.7619 | -1.1638 | 9 | 13.73 | 306.3 | 2.86 | 76.0 | 1.886 | 0.70 | 0.88 | 0 | 0 | 0.63 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 2 protein clashes
|
|
| T10 T10 |
|
200 | 10 Front 10 |
Binding
Medium
Geometry
Bad
Data
Complete
Action
Redock or minimize
|
OHD_Leishmania_143
native-like contacts
DetailsWhy selected: Some docking support, native-like contact pattern, and good contact coverage.
Main concern: geometry warning; 9 clashes; 15 protein contact clashes; high strain Δ 47.2, geometry warning, and strain ΔE = 47.2 kcal/mol.
Action: Redock the ligand or locally minimize the pose before accepting it as a serious hit.
MW 302.4 · logP -0.56 · TPSA 88.8
|
41.5 | 0.53 | 2.3540 | -1.1084 | 11 | 47.16 | 302.4 | -0.56 | 88.8 | 4.002 | 0.73 | 0.70 | 0 | 0 | 0.79 |
SASA: Done
RDKit SASA
Burial and SASA metrics computed via rdkit.Chem.rdFreeSASA.
|
Geometry warning, geometry warning; 9 clashes; 15 protein contact clashes; high strain Δ 47.2
|
Score composition ▼ show
Docking 28% · final rank, interaction-normalized score, raw docking score
Burial 18% · absolute exposed hydrophobic atom count (lower is better)
Strain 14% · strain delta, intra score, geometry sanity
Safety / ADMET 18% · ADMET score with hERG/AMES/DILI/bioaccumulation penalties — Pareto objective
Ecotoxicology 9% · fish/daphnia/algae LC50 classes + bioaccumulation + persistence — Pareto objective
Synthesis 10% · SA score when available, otherwise Fsp3 proxy
Native similarity 12% · contact and H-bond recall when a native reference exists
Diversity shortlist 0% · cached shortlist already includes the novelty-aware selection step
How ranking works: Pareto fronts are built from six default objectives — docking score, ligand efficiency, burial depth, strain energy, ADMET safety, and ecotoxicology (fish/daphnia/algae LC₅₀ + bioaccumulation + persistence). Front 1 contains non-dominated ligands: no other ligand beats them across all six objectives simultaneously. Inside each front, ligands are ordered by a compromise score with explicit penalties for PAINS, reactivity, toxicity alerts, geometry warnings, excluded poses, and artifact annotations. The top 200 are returned using a diversity-aware selection step.
Methodology ▼ show
1. Candidate definition. For each target we keep one best pose per ligand, so the shortlist is not inflated by many similar poses of the same compound.
2. Objective set. Each ligand is evaluated across docking quality, absolute nonpolar solvent exposure (`n_exposed`), conformational strain, native-like interaction similarity when a native reference exists, safety and ecotoxicology, synthesizability, and general developability indicators such as QED.
2a. SASA / burial source. `SASA: done` = cached FreeSASA metrics. `queued/running` = background worker scheduled. `failed` = worker failed. `missing` = no SASA cached yet.
3. Liability penalties. PAINS motifs, reactive groups, toxicity alerts, artifact annotations, geometry warnings, and excluded-pose flags reduce the compromise score and are shown explicitly.
4. Pareto ranking. Front 1 = non-dominated ligands (no other ligand is better in all objectives simultaneously). Lower front number = more balanced profile.
5. Missing SASA handling. Missing SASA lowers `Data completeness` to `Provisional` but does not automatically reject a ligand. Binding and geometry axes stay independent.
6. Compromise score. `100 × clamp(weighted positive − liability penalty − missing-data penalty)`. Weights: docking 28%, burial 18%, strain 14%, safety/ecotox 18%, synthesis 10%, native similarity 12% (when reference exists).
7. Component details. Docking = `final_rank_score` 55% + `score_inter_norm` 30% + raw `score` 15%. Strain = `strain_delta` 55% + `score_intra_norm` 30% + geometry sanity 15%.
8. Final shortlist. Top 50 per target taken front-by-front with diversity-aware selection — near-duplicate analogs do not dominate.
How to read the table. `Pareto` = non-dominated layer, `Compromise` = within-front ordering score, `n_exposed` = burial proxy (lower is better), `Strain dE` = conformational stress, colored dots = quick green/orange/red cue.
How to use selections. Mark compounds row-by-row, save to `Current`/`Temp`/`A/B/C` sets, export to SDF/XLSX/CSV, or send to downstream analysis pages.