FAIRMol

Z1880962221

ID 2224

DB Docking_panel_21This detail page is pinned to the current database context.
Back to results Open docking pose (8)
2D structure

SMILES: Cc1cc(Nc2ccc(NC(=O)c3ccc(Nc4cc[nH+]c5ccccc45)cc3)cc2)nc(N)[nH+]1

Formula: C27H25N7O+2 | MW: 463.5450000000001

LogP: 4.493120000000002 | TPSA: 120.35

HBA/HBD: 5/4 | RotB: 6

InChIKey: QSYLKMKIVWJAAK-UHFFFAOYSA-P

Recognized patterns

Click a named motif to highlight it in the 2D depiction or launch reverse search.

Bio motif

ATP mimic pyrimidine Hinge binder (C=O-NH) Hinge binder (NH-C=O) H-bond acceptor N ×3 H-bond acceptor O H-bond donor ×6 Gatekeeper aromatic ×3 Ionizable base ×3 Metal chelator

Functional group

Carbonyl Amide Primary amine Secondary amine ×3

Ring system

Benzene ×3 Pyridine Quinoline Pyrimidine
3D loads on demand to keep the page fast.

Properties

NameValueUnit
DOCK_BASE_INTER_RANK-0.714727-
DOCK_BASE_INTER_RANK-0.660703-
DOCK_BOND_LENGTH_OUTLIERS0.000000-
DOCK_BOND_LENGTH_OUTLIERS0.000000-
DOCK_CLASH_COUNT19.000000-
DOCK_CLASH_COUNT20.000000-
DOCK_CONTACT_COUNT21.000000-
DOCK_CONTACT_COUNT17.000000-
DOCK_EXPERIMENTT11-
DOCK_EXPERIMENTT14-
DOCK_EXPERIMENT_ID9-
DOCK_EXPERIMENT_ID12-
DOCK_FINAL_RANK6.255218-
DOCK_FINAL_RANK6.498970-
DOCK_GEOMETRY_ALERTwarning-
DOCK_GEOMETRY_ALERTwarning-
DOCK_GEOM_OK0-
DOCK_GEOM_OK0-
DOCK_HARD_GEOMETRY_FAIL0-
DOCK_HARD_GEOMETRY_FAIL0-
DOCK_IFP::A:ALA401-
DOCK_IFP::A:ARG2421-
DOCK_IFP::A:ARG3371-
DOCK_IFP::A:ARG501-
DOCK_IFP::A:ASN1251-
DOCK_IFP::A:ASN1931-
DOCK_IFP::A:ASP2431-
DOCK_IFP::A:ASP3851-
DOCK_IFP::A:ASP471-
DOCK_IFP::A:GLN1241-
DOCK_IFP::A:GLU1921-
DOCK_IFP::A:GLY1911-
DOCK_IFP::A:GLY2401-
DOCK_IFP::A:HIS1441-
DOCK_IFP::A:HIS2221-
DOCK_IFP::A:ILE1261-
DOCK_IFP::A:LEU1941-
DOCK_IFP::A:LEU3391-
DOCK_IFP::A:LEU3501-
DOCK_IFP::A:LEU3721-
DOCK_IFP::A:LEU931-
DOCK_IFP::A:LEU951-
DOCK_IFP::A:LYS511-
DOCK_IFP::A:PHE1891-
DOCK_IFP::A:PHE1901-
DOCK_IFP::A:PHE1991-
DOCK_IFP::A:PHE511-
DOCK_IFP::A:PHE741-
DOCK_IFP::A:PRO2231-
DOCK_IFP::A:PRO3381-
DOCK_IFP::A:PRO3401-
DOCK_IFP::A:SER2821-
DOCK_IFP::A:THR2411-
DOCK_IFP::A:TYR3701-
DOCK_IFP::A:TYR3711-
DOCK_IFP::A:VAL1871-
DOCK_IFP::A:VAL1881-
DOCK_IFP::A:VAL2211-
DOCK_IMPORT_SCOPEbest_by_name-
DOCK_IMPORT_SCOPEbest_by_name-
DOCK_MAX_CLASH_OVERLAP0.681088-
DOCK_MAX_CLASH_OVERLAP0.681104-
DOCK_POSE_COUNT4-
DOCK_POSE_COUNT4-
DOCK_PRE_RANK5.472218-
DOCK_PRE_RANK5.551367-
DOCK_PRIMARY_POSE_ID22452-
DOCK_PRIMARY_POSE_ID30221-
DOCK_RANKING_MODEinter_strain_penalized-
DOCK_RANKING_MODEinter_strain_penalized-
DOCK_REPORT_IDdockmulti_91311c650f2e_T11-
DOCK_REPORT_IDdockmulti_91311c650f2e_T14-
DOCK_RESIDUE_CONTACTSA:ALA40;A:ASN125;A:ASN193;A:GLN124;A:GLU192;A:GLY191;A:HIS144;A:HIS222;A:ILE126;A:LEU194;A:LEU93;A:LEU95;A:PHE189;A:PHE190;A:PHE199;A:PHE51;A:PHE74;A:PRO223;A:VAL187;A:VAL188;A:VAL221-
DOCK_RESIDUE_CONTACTSA:ARG242;A:ARG337;A:ARG50;A:ASP243;A:ASP385;A:ASP47;A:GLY240;A:LEU339;A:LEU350;A:LEU372;A:LYS51;A:PRO338;A:PRO340;A:SER282;A:THR241;A:TYR370;A:TYR371-
DOCK_SCAFFOLDO=C(Nc1ccc(Nc2cc[nH+]cn2)cc1)c1ccc(Nc2cc[nH+]c3ccccc23)cc1-
DOCK_SCAFFOLDO=C(Nc1ccc(Nc2cc[nH+]cn2)cc1)c1ccc(Nc2cc[nH+]c3ccccc23)cc1-
DOCK_SCORE-19.244000-
DOCK_SCORE-20.506900-
DOCK_SCORE_INTER-25.015400-
DOCK_SCORE_INTER-23.124600-
DOCK_SCORE_INTER_KCAL-5.974828-
DOCK_SCORE_INTER_KCAL-5.523218-
DOCK_SCORE_INTER_NORM-0.714727-
DOCK_SCORE_INTER_NORM-0.660703-
DOCK_SCORE_INTRA5.771420-
DOCK_SCORE_INTRA2.304910-
DOCK_SCORE_INTRA_KCAL1.378481-
DOCK_SCORE_INTRA_KCAL0.550519-
DOCK_SCORE_INTRA_NORM0.164898-
DOCK_SCORE_INTRA_NORM0.065855-
DOCK_SCORE_KCAL-4.596352-
DOCK_SCORE_KCAL-4.897991-
DOCK_SCORE_NORM-0.549829-
DOCK_SCORE_NORM-0.585910-
DOCK_SCORE_RESTR0.000000-
DOCK_SCORE_RESTR0.312828-
DOCK_SCORE_RESTR_NORM0.000000-
DOCK_SCORE_RESTR_NORM0.008938-
DOCK_SCORE_SYSTEM0.000000-
DOCK_SCORE_SYSTEM0.000000-
DOCK_SCORE_SYSTEM_NORM0.000000-
DOCK_SCORE_SYSTEM_NORM0.000000-
DOCK_SELECTION_EXCLUDED0-
DOCK_SELECTION_EXCLUDED0-
DOCK_SEVERE_CLASH_COUNT0.000000-
DOCK_SEVERE_CLASH_COUNT0.000000-
DOCK_SOURCE_FILEresults_T11_top1000.sdf-
DOCK_SOURCE_FILEresults_T14_top1000.sdf-
DOCK_SOURCE_FORMULAC27H25N7O+2-
DOCK_SOURCE_FORMULAC27H25N7O+2-
DOCK_SOURCE_HBA5.000000-
DOCK_SOURCE_HBA5.000000-
DOCK_SOURCE_HBD4.000000-
DOCK_SOURCE_HBD4.000000-
DOCK_SOURCE_HEAVY_ATOMS35.000000-
DOCK_SOURCE_HEAVY_ATOMS35.000000-
DOCK_SOURCE_LOGP4.493120-
DOCK_SOURCE_LOGP4.493120-
DOCK_SOURCE_MW463.545000-
DOCK_SOURCE_MW463.545000-
DOCK_SOURCE_NAMEZ1880962221-
DOCK_SOURCE_NAMEZ1880962221-
DOCK_SOURCE_RINGS5.000000-
DOCK_SOURCE_RINGS5.000000-
DOCK_SOURCE_TPSA120.350000-
DOCK_SOURCE_TPSA120.350000-
DOCK_STRAIN_DELTA25.049992-
DOCK_STRAIN_DELTA27.793371-
DOCK_STRAIN_OK0-
DOCK_STRAIN_OK0-
DOCK_TARGETT11-
DOCK_TARGETT14-
EXACT_MASS463.21096126018006Da
FORMULAC27H25N7O+2-
HBA5-
HBD4-
LOGP4.493120000000002-
MOL_WEIGHT463.5450000000001g/mol
QED_SCORE0.29563473165838433-
ROTATABLE_BONDS6-
TPSA120.35A^2

Samples

BatchAmountPurityState

Containers

NameLocationQR

Docking across targets

This compound is global in the current database. Below you can review all docking experiments and targets that contain imported poses for it, which is the basis for reverse docking analysis.

Open primary docking pose Docking experiments Reverse docking explorer Protein structures Docking IFP projection
TargetExperimentReportPosesBest rankBest scoreNative overlapNative recallRMSD
T11 T11 dockmulti_91311c650f2e_T11 4
native pose available
 6.255217604080693 -19.244 15 0.83 - Best pose
T14 T14 dockmulti_91311c650f2e_T14 4
native pose available
 6.498969706661163 -20.5069 8 0.53 - Best pose
T11 — T11 4 poses · report dockmulti_91311c650f2e_T11
Native comparison is calculated against the uploaded native ligand for the same experiment/target whenever it is available.
PoseFinal rankInter normScoreHBContactsNative overlapNative recallHB strictHB roleHB residueRMSDExcludedNotes
1936 6.255217604080693 -0.714727 -19.244 3 21 15 0.83 0.20 0.20 0.25 - no geometry warning; 19 clashes; 7 protein contact clashes; high strain Δ 25.0 Open pose
1935 6.551282071483337 -0.699542 -23.2506 7 19 12 0.67 0.20 0.20 0.25 - no geometry warning; 20 clashes; 9 protein contact clashes; moderate strain Δ 17.4 Open pose
1934 6.948426210491995 -0.787469 -22.264 4 22 15 0.83 0.20 0.20 0.25 - no geometry warning; 18 clashes; 11 protein contact clashes; high strain Δ 24.0 Open pose
1933 8.335664172410349 -0.661848 -24.1821 3 22 15 0.83 0.40 0.40 0.50 - yes excluded; geometry warning; 17 clashes; 2 protein clashes; moderate strain Δ 12.0 Open pose
T14 — T14 4 poses · report dockmulti_91311c650f2e_T14
Native comparison is calculated against the uploaded native ligand for the same experiment/target whenever it is available.
PoseFinal rankInter normScoreHBContactsNative overlapNative recallHB strictHB roleHB residueRMSDExcludedNotes
2200 6.498969706661163 -0.660703 -20.5069 7 17 8 0.53 0.17 0.20 0.20 - no geometry warning; 20 clashes; 7 protein contact clashes; high strain Δ 27.8 Open pose
2198 6.865612161475974 -0.633187 -20.1901 7 18 11 0.73 0.17 0.20 0.20 - yes excluded; geometry warning; 17 clashes; 1 protein clash; high strain Δ 20.9 Open pose
2197 8.001628279156558 -0.67604 -19.6158 6 18 14 0.93 0.33 0.40 0.60 - yes excluded; geometry warning; 17 clashes; 2 protein clashes; moderate strain Δ 19.6 Open pose
2199 8.879778250284934 -0.685131 -21.9456 8 18 11 0.73 0.17 0.20 0.40 - yes excluded; geometry warning; 16 clashes; 2 protein clashes; moderate strain Δ 18.8 Open pose

Heterocycles & Functional Groups

Analysis powered by faircheckmol_nodb — click any item to highlight its atoms in the structure.
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Drug Similarity

Shared structural fragments with approved drugs — based on faircheckmol profile fingerprint.
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Structural Profile Fingerprint

Named-bit fingerprint from curated SMARTS patterns. Each bit = one chemical pattern.

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ADMET Profile

Computed from structure using RDKit. Indicative only — not a substitute for experimental data.

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3D Conformer

ETKDGv3 conformer generation with UFF minimisation. Rendered with 3Dmol.js.

Open receptor–ligand complex
This docking hit has a stored pose-level complex analysis page with clickable hydrogen bonds, π–π contacts, hydrophobic contacts, and clash inspection.
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⚗ AI Structural Analysis

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